X-Ray Diffraction data from Extracellular domain of mouse NKR-P1A, source of 3M9Z structure

Data DOI: 10.15785/SBGRID/824 | ID: 824

Publication DOI: 10.1016/j.jsb.2011.05.001

3M9Z Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Dohnalek Laboratory, Institute of Biotechnology of the Czech Academy of Sciences

Release Date: March 26, 2021

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/824

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/824 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/824 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/824 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/824 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 824 ; shasum -c files.sha'

Storage requirements: 1.8G

Biological Sample:

Extracellular domain of mouse NKR-P1A

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

Bessy 14.1

Data Creation Date:

May 12, 2009

Related Datasets:

None


Cite this Dataset

Skalova, T; Hasek, J; Kolenko, P; Rozbesky, D; Vanek, O; Dohnalek, J. 2021. "X-Ray Diffraction data for: Extracellular domain of mouse NKR-P1A. PDB Code 3M9Z", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/824.

Download Citation

Dataset Description

native data set

Project Members

Name Additional Roles Affiliation While Working on the Project
Tereza SkalovaData Collector, DepositorInstitute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovskeho nam. 2, 162 06 Praha 6, Czech Republic
Jan DohnalekData CollectorInstitute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovskeho nam. 2, 162 06 Praha 6, Czech Republic
Jindrich HasekData CollectorInstitute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovskeho nam. 2, 162 06 Praha 6, Czech Republic
Petr KolenkoData CollectorInstitute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovskeho nam. 2, 162 06 Praha 6, Czech Republic
Dan RozbeskyData CollectorDepartment of Biochemistry, Faculty of Science, Charles University Prague, Hlavova 8, 128 40 Praha, Czech Republic
Ondrej VanekData CollectorDepartment of Biochemistry, Faculty of Science, Charles University Prague, Hlavova 8, 128 40 Praha, Czech Republic
Jan DohnalekPIInstitute of Biotechnology of the Czech Academy of Sciences

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.91841

Sweep:

SWEEP1

Files:

/programs/datagrid/824/ma97_go_1_###.img

Images:

1 - 98

Beam:

(112.5, 112.5) -> (112.5, 112.39)

Distance:

198.36 -> 199.07

Spacegroup:

I 4 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.66 4.51 1.66
Low resolution limit 56.23 56.26 1.69
Completeness 99.5 99.9 95.3
Multiplicity 7.1 7.0 3.8
I/sigma 10.1 45.1 1.4
Rmerge 0.108 0.049 0.927
CC half 0.959 0.994 0.169
Anomalous completeness 99.3 100.0 91.2
Anomalous multiplicity 3.8 3.8 3.8
Cell 60.076 60.076 159.701 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.