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X-Ray Diffraction data from E. coli RssB, source of 7LCM structure

Data DOI: 10.15785/SBGRID/818 | ID: 818

Publication DOI: 10.1002/pro.4047

7LCM Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Deaconescu Laboratory, Brown University

Release Date: April 2, 2021

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/818

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/818 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/818 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/818 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/818 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 818 ; shasum -c files.sha'

Storage requirements: 7.6G

Biological Sample:

E. coli RssB

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

Advanced Photon Source Beamline 24-IDC

Data Creation Date:

April 12, 2020

Related Datasets:

None


Cite this Dataset

Son, J; Deaconescu, AM. 2021. "X-Ray Diffraction data for: E. coli RssB. PDB Code 7LCM", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/818.

Download Citation

Dataset Description

Receiver domain of RssB bound to beryllofluoride

Project Members

Name Additional Roles Affiliation While Working on the Project
Jonghyeon SonData CollectorBrown University
Alexandra M DeaconescuDepositor, PIBrown University

Reprocessing Instructions

Data were processed with XDS.

Processing Bundle

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/818/AMD01_6_1_######.cbf

Images:

1 - 450

Beam:

(163.9, 154.37) -> (163.9, 154.33)

Distance:

300.0 -> 300.01

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.8 4.88 1.8
Low resolution limit 37.01 37.01 1.83
Completeness 97.3 100.0 79.0
Multiplicity 9.0 8.3 5.3
I/sigma 15.4 43.7 0.8
Rmerge 0.064 0.032 1.728
CC half 0.999 0.999 0.317
Anomalous completeness 96.6 100.0 76.6
Anomalous multiplicity 4.9 4.9 4.9
Cell 46.32 46.32 95.87 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/818/AMD01_6_1_######.cbf

Images:

1 - 450

Beam:

(163.9, 154.37) -> (163.9, 154.34)

Distance:

300.0 -> 299.68

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.8 4.88 1.8
Low resolution limit 40.11 40.12 1.83
Completeness 97.3 100.0 79.0
Multiplicity 9.0 8.3 5.3
I/sigma 15.4 43.7 0.8
Rmerge 0.064 0.031 1.72
CC half 0.999 0.999 0.317
Anomalous completeness 96.6 100.0 76.6
Anomalous multiplicity 4.9 4.9 4.9
Cell 46.32 46.32 95.87 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/818/AMD01_6_1_######.cbf

Images:

1 - 450

Beam:

(163.9, 154.37) -> (163.9, 154.33)

Distance:

300.0 -> 297.98

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.74 4.71 1.74
Low resolution limit 40.05 40.06 1.77
Completeness 95.0 100.0 69.6
Multiplicity 8.7 8.7 4.5
I/sigma 12.9 51.6 0.3
Rmerge 0.072 0.037 1.756
CC half 0.999 0.999 0.357
Anomalous completeness 94.0 100.0 67.1
Anomalous multiplicity 4.8 4.8 4.8
Cell 46.242 46.242 95.681 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.