2-Oxo-acid Dehydrogenase Complex component proteins from C. thermophilum

Data DOI: 10.15785/SBGRID/817 | ID: 817

Publication DOI: 10.1016/j.celrep.2021.108727

7BGJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Kastritis Laboratory, Martin Luther University Halle-Wittenberg

Release Date: Jan. 26, 2021

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/817

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/817 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/817 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/817 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/817 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 817 ; shasum -c files.sha'

Storage requirements: 37M

Biological Sample:

2-Oxo-acid Dehydrogenase Complex component proteins from C. thermophilum

Dataset Type:

Structural Model

Subject Composition:


Collection Facility:


Data Creation Date:

Oct. 1, 2020

Related Datasets:


Cite this Dataset

Tueting, C; Kastritis, P. 2021. "2-Oxo-acid Dehydrogenase Complex component proteins from C. thermophilum. PDB Code 7BGJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/817.

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Dataset Description

Structural models of the E1 and E2 proteins of Pyruvate Dehydrogenase Complex (PDHc), 2-Oxoglutarate Dehydrogenase (OGDHc), and Branched-Chain alpha-Keto Acid Dehydrogenase Complex (BCKDHc), E3BP of PDHc and E3, shared among all three complexes. In addition, a cif-file of E1, E2, E3BP, and E3 of PDHc modeled from cryoEM data is provided. Models were generated by homology modeling using MODELLER and refined using HADDOCK webserver.

Project Members

Name Additional Roles Affiliation While Working on the Project
Christian TuetingData Collector, DepositorMartin Luther University Halle-Wittenberg
Panagiotis L. KastritisPIMartin Luther University Halle-Wittenberg

Reprocessing Instructions


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.