Data DOI: 10.15785/SBGRID/817 | ID: 817
Publication DOI: 10.1016/j.celrep.2021.108727
7BGJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Kastritis Laboratory, Martin Luther University Halle-Wittenberg
Release Date: 26 Jan 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/817
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/817 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/817 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/817 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/817 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 817 ; shasum -c files.sha'
Storage requirements: 37M
Biological Sample:
2-Oxo-acid Dehydrogenase Complex component proteins from C. thermophilum
Dataset Type:
Structural Model
Subject Composition:
Protein
Collection Facility:
N/A
Data Creation Date:
1 Oct 2020
Related Datasets:
None
Tueting, C; Kastritis, P. 2021. "2-Oxo-acid Dehydrogenase Complex component proteins from C. thermophilum. PDB Code 7BGJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/817.
Structural models of the E1 and E2 proteins of Pyruvate Dehydrogenase Complex (PDHc), 2-Oxoglutarate Dehydrogenase (OGDHc), and Branched-Chain alpha-Keto Acid Dehydrogenase Complex (BCKDHc), E3BP of PDHc and E3, shared among all three complexes. In addition, a cif-file of E1, E2, E3BP, and E3 of PDHc modeled from cryoEM data is provided. Models were generated by homology modeling using MODELLER and refined using HADDOCK webserver.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Christian Tueting | Data Collector, Depositor | Martin Luther University Halle-Wittenberg |
| Panagiotis L. Kastritis | PI | Martin Luther University Halle-Wittenberg |
N/A
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
