X-Ray Diffraction data from Receiver domain of E. coli RssB, source of 7L9C structure

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Data DOI: 10.15785/SBGRID/815 | ID: 815

Publication DOI: 10.1002/pro.4047

7L9C Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Deaconescu Laboratory, Brown University

Release Date: 2 Apr 2021

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/815

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/815 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/815 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/815 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/815 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 815 ; shasum -c files.sha'

Storage requirements: 15G

Biological Sample:

Receiver domain of E. coli RssB

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

Beamline 24-ID-C, NE-CAT, Advanced Photon Source

Data Creation Date:

23 Feb 2020

Related Datasets:

None


Cite this Dataset

Deaconescu, AM. 2021. "X-Ray Diffraction data for: Receiver domain of E. coli RssB. PDB Code 7L9C", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/815.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Alexandra M DeaconescuData Collector, Depositor, PIBrown University

Reprocessing Instructions

This data was indexed in space group P3221 and processed using XDS.

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d /programs/datagrid//815/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii /programs/datagrid//815/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials /programs/datagrid//815/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97911

Sweep:

SWEEP1

Files:

/programs/datagrid/815/AMD01_3_EG25_1_######.cbf

Images:

1 - 840

Beam:

(163.9, 154.37) -> (163.9, 154.39)

Distance:

300.0 -> 298.48

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.68 4.57 1.68
Low resolution limit 95.51 95.66 1.71
Completeness 94.8 100.0 67.5
Multiplicity 9.6 10.3 3.9
I/sigma 10.1 45.3 0.2
Rmerge 0.07 0.046 1.767
CC half 0.999 0.999 0.283
Anomalous completeness 94.9 99.8 66.9
Anomalous multiplicity 5.2 5.2 5.2
Cell 46.271 46.271 95.505 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.