Data DOI: 10.15785/SBGRID/809 | ID: 809
6ZE7 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Dohnalek Laboratory, Institute of Biotechnology of the Czech Academy of Sciences
Release Date: 18 May 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/809
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/809 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/809 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/809 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/809 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 809 ; shasum -c files.sha'
Storage requirements: 14G
Biological Sample:
FAD-dependent oxidoreductase from Chaetomium thermophilum in complex with 4-nitrophenol
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
Beamline 14.1, Bessy II, Helmholz Zentrum, Berlin, Germany
Data Creation Date:
5 Oct 2017
Related Datasets:
None
Svecova, L; Kolenko, P; Koval, T; Oestergaard, LH.; Skalova, T; Dohnalek, J. 2021. "X-Ray Diffraction data for: FAD-dependent oxidoreductase from Chaetomium thermophilum in complex with 4-nitrophenol. PDB Code 6ZE7", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/809.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Leona Svecova | Data Collector, Depositor | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Jan Dohnalek | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Petr Kolenko | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Tomas Koval | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Lars H. Oestergaard | Data Collector | Novozymes A/S, Biologiens Vej 2, Kongen. Lyngby, 2800, Denmark |
| Tereza Skalova | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Jan Dohnalek | PI | Institute of Biotechnology of the Czech Academy of Sciences |
First 1000 images were excluded.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9184
Sweep:
SWEEP1
Files:
/programs/datagrid/809/11l_go_1_####.cbf
Images:
1 - 2400
Beam:
(216.69, 213.5) -> (216.69, 213.33)
Distance:
293.45 -> 292.32
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.32 | 3.58 | 1.32 |
| Low resolution limit | 49.53 | 49.57 | 1.34 |
| Completeness | 93.5 | 99.9 | 60.4 |
| Multiplicity | 8.4 | 8.4 | 5.4 |
| I/sigma | 10.4 | 35.3 | 0.7 |
| Rmerge | 0.099 | 0.041 | 1.59 |
| CC half | 0.998 | 0.998 | 0.314 |
| Anomalous completeness | 92.7 | 99.1 | 58.4 |
| Anomalous multiplicity | 4.4 | 4.4 | 4.4 |
| Cell | 92.59 | 109.64 | 115.62 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9184
Sweep:
SWEEP1
Files:
/programs/datagrid/809/11l_go_1_####.cbf
Images:
1 - 2400
Beam:
(216.69, 213.5) -> (216.69, 213.29)
Distance:
293.45 -> 291.88
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.32 | 3.58 | 1.32 |
| Low resolution limit | 49.53 | 49.57 | 1.34 |
| Completeness | 93.5 | 99.9 | 60.4 |
| Multiplicity | 8.4 | 8.4 | 5.4 |
| I/sigma | 10.4 | 35.3 | 0.7 |
| Rmerge | 0.099 | 0.041 | 1.589 |
| CC half | 0.998 | 0.998 | 0.315 |
| Anomalous completeness | 92.7 | 99.1 | 58.4 |
| Anomalous multiplicity | 4.4 | 4.4 | 4.4 |
| Cell | 92.59 | 109.64 | 115.62 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9184
Sweep:
SWEEP1
Files:
/programs/datagrid/809/11l_go_1_####.cbf
Images:
1 - 2400
Beam:
(216.69, 213.5) -> (216.69, 213.3)
Distance:
293.45 -> 292.1
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.27 | 3.45 | 1.27 |
| Low resolution limit | 54.84 | 54.89 | 1.29 |
| Completeness | 89.1 | 100.0 | 49.0 |
| Multiplicity | 8.1 | 8.5 | 4.4 |
| I/sigma | 10.4 | 41.5 | 0.5 |
| Rmerge | 0.105 | 0.06 | 1.406 |
| CC half | 0.996 | 0.993 | 0.36 |
| Anomalous completeness | 88.2 | 99.6 | 47.0 |
| Anomalous multiplicity | 4.2 | 4.2 | 4.2 |
| Cell | 92.621 | 109.681 | 115.633 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
