Data DOI: 10.15785/SBGRID/808 | ID: 808
6ZE6 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Dohnalek Laboratory, Institute of Biotechnology of the Czech Academy of Sciences
Release Date: 18 May 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/808
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/808 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/808 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/808 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/808 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 808 ; shasum -c files.sha'
Storage requirements: 4.7G
Biological Sample:
Chaetomium thermophilum FAD-dependent oxidoreductase in complex with 4-nitrocatechol
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
Beamline 14.2, Bessy II, Helmholz Zentrum, Berlin, Germany
Data Creation Date:
17 Jan 2019
Related Datasets:
None
Svecova, L; Kolenko, P; Koval, T; Oestergaard, LH.; Skalova, T; Dohnalek, J. 2021. "X-Ray Diffraction data for: Chaetomium thermophilum FAD-dependent oxidoreductase in complex with 4-nitrocatechol. PDB Code 6ZE6", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/808.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Leona Svecova | Data Collector, Depositor | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Jan Dohnalek | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Petr Kolenko | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Tomas Koval | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Lars H. Oestergaard | Data Collector | Novozymes A/S, Biologiens Vej 2, Kongen. Lyngby, 2800, Denmark |
| Tereza Skalova | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Jan Dohnalek | PI | Institute of Biotechnology of the Czech Academy of Sciences |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9184
Sweep:
SWEEP1
Files:
/programs/datagrid/808/k01_go_1_####.cbf
Images:
1 - 2000
Beam:
(144.2, 127.7) -> (144.2, 127.78)
Distance:
159.95 -> 160.16
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.15 | 3.12 | 1.15 |
| Low resolution limit | 22.74 | 22.74 | 1.17 |
| Completeness | 89.2 | 98.8 | 39.7 |
| Multiplicity | 6.9 | 7.2 | 4.1 |
| I/sigma | 13.8 | 54.3 | 0.9 |
| Rmerge | 0.058 | 0.02 | 1.252 |
| CC half | 1.0 | 1.0 | 0.388 |
| Anomalous completeness | 87.3 | 96.8 | 36.5 |
| Anomalous multiplicity | 3.6 | 3.6 | 3.6 |
| Cell | 93.57 | 109.75 | 116.08 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9184
Sweep:
SWEEP1
Files:
/programs/datagrid/808/k01_go_1_####.cbf
Images:
1 - 2000
Beam:
(144.2, 127.7) -> (144.2, 127.8)
Distance:
159.95 -> 160.16
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.08 | 2.93 | 1.08 |
| Low resolution limit | 30.12 | 30.13 | 1.1 |
| Completeness | 77.1 | 98.6 | 6.3 |
| Multiplicity | 6.8 | 7.2 | 2.0 |
| I/sigma | 8.1 | 46.7 | 0.1 |
| Rmerge | 0.075 | 0.035 | 1.895 |
| CC half | 0.998 | 0.997 | 0.223 |
| Anomalous completeness | 75.1 | 97.8 | 3.2 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 93.572 | 109.764 | 116.076 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
