Data DOI: 10.15785/SBGRID/805 | ID: 805
6ZE3 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Dohnalek Laboratory, Institute of Biotechnology of the Czech Academy of Sciences
Release Date: 18 May 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/805
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/805 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/805 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/805 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/805 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 805 ; shasum -c files.sha'
Storage requirements: 4.7G
Biological Sample:
Chaetomium thermophilum FAD-dependent oxidoreductase in complex with methyl4-(aminomethyl)benzoate
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline 14.2, Bessy II, Helmholz Zentrum, Berlin, Germany
Data Creation Date:
15 May 2019
Related Datasets:
None
Svecova, L; Kolenko, P; Koval, T; Oestergaard, LH.; Skalova, T; Dohnalek, J. 2021. "X-Ray Diffraction data for: Chaetomium thermophilum FAD-dependent oxidoreductase in complex with methyl4-(aminomethyl)benzoate. PDB Code 6ZE3", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/805.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Leona Svecova | Data Collector, Depositor | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Jan Dohnalek | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Petr Kolenko | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Tomas Koval | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Lars H. Oestergaard | Data Collector | Novozymes A/S, Biologiens Vej 2, Kongen. Lyngby, 2800, Denmark |
| Tereza Skalova | Data Collector | Institute of Biotechnology of the Czech Academy of Sciences, Laboratory of Structure and Function of Biomolecules, Prumyslova 595, Vestec 25250, Czech Republic |
| Jan Dohnalek | PI | Institute of Biotechnology of the Czech Academy of Sciences |
none
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9184
Sweep:
SWEEP1
Files:
/programs/datagrid/805/vl18-go_1_####.cbf
Images:
1 - 2000
Beam:
(144.75, 127.7) -> (144.75, 127.48)
Distance:
222.69 -> 224.4
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.07 | 5.61 | 2.07 |
| Low resolution limit | 28.93 | 28.94 | 2.11 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 7.3 | 6.9 | 7.8 |
| I/sigma | 7.7 | 26.5 | 0.9 |
| Rmerge | 0.18 | 0.046 | 2.25 |
| CC half | 0.996 | 0.998 | 0.315 |
| Anomalous completeness | 99.7 | 99.3 | 99.9 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 109.79 | 115.74 | 46.65 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9184
Sweep:
SWEEP1
Files:
/programs/datagrid/805/vl18-go_1_####.cbf
Images:
1 - 2000
Beam:
(144.75, 127.7) -> (144.75, 127.49)
Distance:
222.69 -> 223.64
Spacegroup:
P 2 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.89 | 5.13 | 1.89 |
| Low resolution limit | 30.97 | 30.98 | 1.93 |
| Completeness | 99.5 | 100.0 | 89.2 |
| Multiplicity | 7.2 | 6.8 | 7.4 |
| I/sigma | 2.7 | 14.6 | 0.4 |
| Rmerge | 0.28 | 0.122 | 1.249 |
| CC half | 0.986 | 0.985 | 0.517 |
| Anomalous completeness | 99.3 | 99.8 | 89.5 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 46.721 | 109.912 | 115.989 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
