X-Ray Diffraction data from Engineered mouse Tubulin Tyrosine Ligase Like Enzyme 6 in complex with Initiation analog, source of 6VZR structure

Data DOI: 10.15785/SBGRID/803 | ID: 803

Publication DOI: 10.1038/s41594-020-0462-0

6VZR Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Roll-Mecak Laboratory, National Institutes of Health

Release Date: 14 Aug 2020

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/803

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/803 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/803 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/803 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/803 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 803 ; shasum -c files.sha'

Storage requirements: 4.2G

Biological Sample:

Engineered mouse Tubulin Tyrosine Ligase Like Enzyme 6 in complex with Initiation analog

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS 5.0.1

Data Creation Date:

5 Aug 2019

Related Datasets:

None


Cite this Dataset

Mahalingan, K; Roll-Mecak, A. 2020. "X-Ray Diffraction data for: Engineered mouse Tubulin Tyrosine Ligase Like Enzyme 6 in complex with Initiation analog. PDB Code 6VZR", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/803.

Download Citation

Dataset Description

Engineered mouse Tubulin Tyrosine Ligase Like Enzyme 6 in complex with Initiation analog

Project Members

Name Additional Roles Affiliation While Working on the Project
Krishna Kishore MahalinganData Collector, DepositorPost doctoral fellow
Antonina Roll-MecakPrincipal Investigator
Antonina Roll-MecakPINational Institutes of Health

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/803/Arm6_9_5_#####.cbf

Images:

1 - 720

Beam:

(223.94, 237.7) -> (223.94, 237.47)

Distance:

420.0 -> 418.67

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.09 5.67 2.09
Low resolution limit 85.76 85.84 2.13
Completeness 100.0 100.0 100.0
Multiplicity 12.9 12.2 11.8
I/sigma 9.7 35.4 0.6
Rmerge 0.197 0.039 3.7
CC half 0.999 1.0 0.239
Anomalous completeness 99.5 99.9 99.9
Anomalous multiplicity 6.8 6.8 6.8
Cell 75.06 108.76 171.53 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/803/Arm6_9_5_#####.cbf

Images:

1 - 720

Beam:

(223.94, 237.7) -> (223.94, 237.45)

Distance:

420.0 -> 419.92

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.08 5.65 2.08
Low resolution limit 68.77 68.81 2.12
Completeness 100.0 100.0 100.0
Multiplicity 12.9 12.2 11.6
I/sigma 9.5 35.2 0.6
Rmerge 0.2 0.039 3.943
CC half 0.999 1.0 0.257
Anomalous completeness 99.5 99.9 99.9
Anomalous multiplicity 6.8 6.8 6.8
Cell 75.07 108.77 171.54 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/803/Arm6_9_5_#####.cbf

Images:

1 - 720

Beam:

(223.94, 237.7) -> (223.94, 237.47)

Distance:

420.0 -> 419.64

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.0 5.43 2.0
Low resolution limit 108.68 108.84 2.04
Completeness 100.0 100.0 99.6
Multiplicity 12.7 12.5 10.0
I/sigma 4.6 25.7 0.2
Rmerge 0.22 0.049 3.682
CC half 0.997 0.998 0.295
Anomalous completeness 100.0 100.0 99.6
Anomalous multiplicity 6.6 6.6 6.6
Cell 75.028 108.68 171.427 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.