X-Ray Diffraction data from PAK4 kinase domain in complex with LIMK1 Thr508 substrate peptide, source of 6WLY structure

Data DOI: 10.15785/SBGRID/782 | ID: 782

6WLY Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: June 19, 2020

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/782

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/782 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/782 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/782 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/782 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 782 ; shasum -c files.sha'

Storage requirements: 13G

Biological Sample:

PAK4 kinase domain in complex with LIMK1 Thr508 substrate peptide

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24-ID-E

Data Creation Date:

July 7, 2018

Related Datasets:

None


Cite this Dataset

Chetty, AK; Ha, B; Boggon, TJ. 2020. "X-Ray Diffraction data for: PAK4 kinase domain in complex with LIMK1 Thr508 substrate peptide. PDB Code 6WLY", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/782.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Titus J BoggonData Collector, DepositorYale University
Ashwin K ChettyData CollectorYale University
Byung Hak HaData CollectorYale University
Titus BoggonPIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP2

Files:

/programs/datagrid/782/TJB1_P09c_1_######.cbf

Images:

1 - 360

Beam:

(163.43, 154.41) -> (163.43, 154.48)

Distance:

220.0 -> 220.1

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.85 5.02 1.85
Low resolution limit 58.35 58.38 1.88
Completeness 100.0 100.0 100.0
Multiplicity 25.1 21.6 17.4
I/sigma 16.8 50.1 0.9
Rmerge 0.101 0.052 3.349
CC half 0.999 0.999 0.371
Anomalous completeness 100.0 99.9 100.0
Anomalous multiplicity 13.6 13.6 13.6
Cell 61.69 61.69 179.77 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP2

Files:

/programs/datagrid/782/TJB1_P09c_1_######.cbf

Images:

1 - 360

Beam:

(163.43, 154.41) -> (163.43, 154.48)

Distance:

220.0 -> 220.19

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.85 5.02 1.85
Low resolution limit 59.92 59.95 1.88
Completeness 100.0 100.0 100.0
Multiplicity 25.1 21.6 17.4
I/sigma 16.8 49.8 1.0
Rmerge 0.101 0.052 3.336
CC half 0.999 0.999 0.371
Anomalous completeness 100.0 99.9 100.0
Anomalous multiplicity 13.6 13.6 13.6
Cell 61.69 61.69 179.77 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP2

Files:

/programs/datagrid/782/TJB1_P09c_1_######.cbf

Images:

1 - 360

Beam:

(163.43, 154.41) -> (163.43, 154.48)

Distance:

220.0 -> 220.09

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.77 4.81 1.77
Low resolution limit 61.71 61.75 1.8
Completeness 100.0 100.0 98.7
Multiplicity 25.5 22.8 26.1
I/sigma 10.1 64.8 0.1
Rmerge 0.124 0.06 4.451
CC half 0.999 1.0 0.467
Anomalous completeness 99.9 100.0 98.8
Anomalous multiplicity 13.8 13.8 13.8
Cell 61.627 61.627 179.502 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.