Data DOI: 10.15785/SBGRID/773 | ID: 773
Publication DOI: 10.1016/j.molcel.2020.10.042
6W1B Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Rapoport Laboratory, Harvard Medical School
Release Date: 17 Nov 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/773
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/773 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/773 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/773 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/773 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 773 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
Mouse surfactant protein B, N-terminal domain (Y59A/H79A mutant) with bound lipid
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
APS 24-ID-C
Data Creation Date:
17 Apr 2018
Related Datasets:
None
Bodnar, NO; Wu, X; Rapoport, TA. 2020. "X-Ray Diffraction data for: Mouse surfactant protein B, N-terminal domain (Y59A/H79A mutant) with bound lipid. PDB Code 6W1B", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/773.
Native dataset, 0.979 angstroms
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Nicholas O Bodnar | Depositor | HMS |
| Tom A Rapoport | HMS | |
| Xudong Wu | Data Collector | HMS |
| Tom Rapoport | PI | Harvard Medical School |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/773/puck1_slot1_1_####.cbf
Images:
1 - 1800
Beam:
(216.55, 223.03) -> (216.55, 223.37)
Distance:
400.0 -> 400.13
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.32 | 6.28 | 2.32 |
| Low resolution limit | 30.76 | 30.76 | 2.36 |
| Completeness | 94.3 | 88.4 | 96.7 |
| Multiplicity | 3.6 | 3.6 | 3.6 |
| I/sigma | 8.4 | 21.9 | 0.8 |
| Rmerge | 0.056 | 0.038 | 1.679 |
| CC half | 0.997 | 0.997 | 0.396 |
| Anomalous completeness | 85.4 | 76.0 | 90.5 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 73.49 | 74.59 | 95.623 | 106.748 | 106.302 | 105.13 |
|---|
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/773/puck1_slot1_1_####.cbf
Images:
1 - 1800
Beam:
(216.55, 223.03) -> (216.55, 223.34)
Distance:
400.0 -> 401.4
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.26 | 6.15 | 2.26 |
| Low resolution limit | 84.87 | 84.93 | 2.3 |
| Completeness | 99.5 | 99.3 | 98.4 |
| Multiplicity | 6.9 | 6.9 | 6.3 |
| I/sigma | 9.3 | 53.5 | 0.2 |
| Rmerge | 0.081 | 0.047 | 6.357 |
| CC half | 0.998 | 0.998 | 0.251 |
| Anomalous completeness | 98.7 | 98.9 | 96.7 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 90.427 | 169.736 | 73.758 | 90.0 | 126.88 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
