Data DOI: 10.15785/SBGRID/755 | ID: 755
Publication DOI: 10.1074/jbc.RA120.014177
6VT2 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Iverson Laboratory, Vanderbilt University
Release Date: 1 Sep 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/755
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/755 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/755 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/755 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/755 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 755 ; shasum -c files.sha'
Storage requirements: 7.0G
Biological Sample:
Streptococcus sanguinis strain SK1 with 3sln
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
LSCAT ID-F
Data Creation Date:
5 Dec 2017
Related Datasets:
None
Stubbs, HE; Iverson, T. 2020. "X-Ray Diffraction data for: Streptococcus sanguinis strain SK1 with 3sln. PDB Code 6VT2", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/755.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Haley E Stubbs | Data Collector, Depositor | Vanderbilt University |
| Tina Iverson | PI | Vanderbilt University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/755/SK1_25_17_#####.cbf
Images:
1 - 1200
Beam:
(217.32, 211.82) -> (217.32, 211.85)
Distance:
449.34 -> 449.02
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.92 | 5.21 | 1.92 |
| Low resolution limit | 45.17 | 45.19 | 1.95 |
| Completeness | 92.0 | 99.0 | 59.4 |
| Multiplicity | 5.8 | 5.6 | 3.8 |
| I/sigma | 12.2 | 30.3 | 1.1 |
| Rmerge | 0.096 | 0.037 | 1.913 |
| CC half | 0.998 | 0.999 | 0.39 |
| Anomalous completeness | 89.9 | 96.9 | 56.2 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 81.6 | 271.05 | 46.89 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/755/SK1_25_17_#####.cbf
Images:
1 - 1200
Beam:
(217.32, 211.82) -> (217.32, 211.84)
Distance:
449.34 -> 448.54
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.92 | 5.21 | 1.92 |
| Low resolution limit | 45.17 | 45.19 | 1.95 |
| Completeness | 92.0 | 99.0 | 59.4 |
| Multiplicity | 5.8 | 5.6 | 3.8 |
| I/sigma | 12.2 | 30.3 | 1.1 |
| Rmerge | 0.095 | 0.037 | 1.915 |
| CC half | 0.998 | 0.998 | 0.399 |
| Anomalous completeness | 90.0 | 96.9 | 56.2 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 81.6 | 271.05 | 46.89 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/755/SK1_25_17_#####.cbf
Images:
1 - 1200
Beam:
(217.32, 211.82) -> (217.32, 211.85)
Distance:
449.34 -> 448.43
Spacegroup:
P 2 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.9 | 5.16 | 1.9 |
| Low resolution limit | 46.85 | 46.87 | 1.93 |
| Completeness | 91.1 | 99.3 | 55.8 |
| Multiplicity | 5.9 | 6.0 | 3.7 |
| I/sigma | 6.0 | 29.6 | 0.2 |
| Rmerge | 0.126 | 0.057 | 1.469 |
| CC half | 0.989 | 0.987 | 0.278 |
| Anomalous completeness | 90.1 | 99.5 | 53.4 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 46.854 | 81.505 | 271.0 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
