Data DOI: 10.15785/SBGRID/754 | ID: 754
Publication DOI: 10.1074/jbc.RA120.014177
6VU6 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Iverson Laboratory, Vanderbilt University
Release Date: 1 Sep 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/754
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/754 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/754 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/754 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/754 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 754 ; shasum -c files.sha'
Storage requirements: 7.1G
Biological Sample:
Streptococcus sanguinis strain SK1 adhesin
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
LSCAT ID-F
Data Creation Date:
5 Dec 2017
Related Datasets:
None
Stubbs, HE; Iverson, T. 2020. "X-Ray Diffraction data for: Streptococcus sanguinis strain SK1 adhesin. PDB Code 6VU6", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/754.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Haley E Stubbs | Data Collector, Depositor | Vanderbilt University |
| Tina Iverson | PI | Vanderbilt University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/754/SK1_01_16_#####.cbf
Images:
1 - 1200
Beam:
(217.32, 211.82) -> (217.32, 211.85)
Distance:
325.0 -> 324.69
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.46 | 3.96 | 1.46 |
| Low resolution limit | 41.06 | 41.07 | 1.49 |
| Completeness | 90.1 | 98.9 | 53.9 |
| Multiplicity | 5.6 | 5.8 | 3.0 |
| I/sigma | 15.8 | 36.7 | 1.5 |
| Rmerge | 0.059 | 0.031 | 1.224 |
| CC half | 0.998 | 0.999 | 0.277 |
| Anomalous completeness | 87.1 | 96.7 | 48.9 |
| Anomalous multiplicity | 3.0 | 3.0 | 3.0 |
| Cell | 83.53 | 272.09 | 47.87 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/754/SK1_01_16_#####.cbf
Images:
1 - 1200
Beam:
(217.32, 211.82) -> (217.32, 211.84)
Distance:
325.0 -> 325.09
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.48 | 4.02 | 1.48 |
| Low resolution limit | 45.35 | 45.37 | 1.51 |
| Completeness | 91.6 | 98.9 | 59.3 |
| Multiplicity | 5.7 | 5.8 | 3.2 |
| I/sigma | 16.2 | 36.8 | 1.6 |
| Rmerge | 0.059 | 0.03 | 1.202 |
| CC half | 0.998 | 0.999 | 0.262 |
| Anomalous completeness | 88.7 | 96.8 | 56.3 |
| Anomalous multiplicity | 3.0 | 3.0 | 3.0 |
| Cell | 83.53 | 272.09 | 47.87 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
