X-Ray Diffraction data from Ran-binding domain of human RanBP3 (E352A/R353V mutant), source of 2Y8G structure

Data DOI: 10.15785/SBGRID/74 | ID: 74

Publication DOI: 10.1371/journal.pone.0017011

2Y8G Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Petosa Laboratory, Institut de Biologie Structurale, Grenoble

Release Date: May 11, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/74

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/74 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/74 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/74 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/74 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 74 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

Ran-binding domain of human RanBP3 (E352A/R353V mutant)

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ESRF beamline ID23-1

Data Creation Date:

June 15, 2006

Related Datasets:

None


Cite this Dataset

Langer, K; Petosa, C. 2015. "X-Ray Diffraction data for: Ran-binding domain of human RanBP3 (E352A/R353V mutant). PDB Code 2Y8G", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/74.

Download Citation

Dataset Description

Crystal form 1 native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Carlo PetosaData Collector, DepositorInstitut de Biologie Structurale, Grenoble, France
Karla LangerData CollectorInstitut de Biologie Structurale, Grenoble, France
Carlo PetosaPIInstitut de Biologie Structurale, Grenoble

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0723

Sweep:

SWEEP1

Files:

/programs/datagrid/74/BP3RBDmut_1_###.img

Images:

1 - 180

Beam:

(158.93, 157.05) -> (158.93, 156.89)

Distance:

207.56 -> 206.8

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.46 3.96 1.46
Low resolution limit 53.13 53.16 1.49
Completeness 83.7 99.7 35.3
Multiplicity 10.4 9.9 7.8
I/sigma 21.0 58.7 1.2
Rmerge 0.062 0.025 1.533
CC half 0.999 0.998 0.361
Anomalous completeness 83.1 100.0 34.1
Anomalous multiplicity 5.5 5.5 5.5
Cell 61.344 61.344 137.235 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0723

Sweep:

SWEEP1

Files:

/programs/datagrid/74/BP3RBDmut_1_###.img

Images:

1 - 180

Beam:

(158.93, 157.05) -> (158.93, 156.84)

Distance:

207.56 -> 206.82

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.49 4.04 1.49
Low resolution limit 53.13 53.16 1.52
Completeness 87.0 99.6 41.9
Multiplicity 10.6 10.0 8.3
I/sigma 25.0 73.4 1.2
Rmerge 0.051 0.018 1.537
CC half 1.0 1.0 0.394
Anomalous completeness 86.4 99.8 39.7
Anomalous multiplicity 5.6 5.6 5.6
Cell 61.35 61.35 137.27 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0723

Sweep:

SWEEP1

Files:

/programs/datagrid/74/BP3RBDmut_1_###.img

Images:

1 - 180

Beam:

(158.93, 157.05) -> (158.93, 156.85)

Distance:

207.56 -> 206.82

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.49 4.04 1.49
Low resolution limit 45.76 45.78 1.52
Completeness 87.1 99.7 41.9
Multiplicity 10.6 10.0 8.3
I/sigma 25.0 73.4 1.2
Rmerge 0.051 0.018 1.535
CC half 1.0 1.0 0.393
Anomalous completeness 86.4 99.8 39.7
Anomalous multiplicity 5.6 5.6 5.6
Cell 61.35 61.35 137.27 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.0723

Sweep:

SWEEP1

Files:

/programs/datagrid/74/BP3RBDmut_1_###.img

Images:

1 - 180

Beam:

(158.93, 157.05) -> (158.93, 156.83)

Distance:

207.56 -> 206.56

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.51 4.1 1.51
Low resolution limit 53.08 53.12 1.54
Completeness 88.4 99.9 43.6
Multiplicity 10.7 10.2 8.7
I/sigma 20.9 56.8 1.2
Rmerge 0.056 0.021 1.366
CC half 1.0 0.999 0.618
Anomalous completeness 88.3 100.0 42.5
Anomalous multiplicity 5.7 5.7 5.7
Cell 61.296 61.296 137.153 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.