X-Ray Diffraction data from Human thrombin:tsetse thrombin inhibitor complex, source of 6TKG structure

Data DOI: 10.15785/SBGRID/737 | ID: 737

Publication DOI: 10.1016/j.chembiol.2020.10.002

6TKG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: Oct. 27, 2020

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/737

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/737 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/737 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/737 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/737 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 737 ; shasum -c files.sha'

Storage requirements: 5.8G

Biological Sample:

Human thrombin:tsetse thrombin inhibitor complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALBA BL13 XALOC

Data Creation Date:

Oct. 20, 2017

Related Datasets:

None


Cite this Dataset

Calisto, BM; Pereira, PJB. 2020. "X-Ray Diffraction data for: Human thrombin:tsetse thrombin inhibitor complex. PDB Code 6TKG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/737.

Download Citation

Dataset Description

X-Ray Diffraction data from human thrombin:sulfated TTI complex, source of 6TKG structure

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro JB PereiraDepositorIBMC - Instituto de Biologia Molecular e Celular
Barbara M CalistoData CollectorALBA Synchrotron
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.03324

Sweep:

SWEEP1

Files:

/programs/datagrid/737/TB_TTI0_B_2_####.cbf

Images:

1 - 1000

Beam:

(224.95, 212.35) -> (224.95, 212.34)

Distance:

196.64 -> 196.46

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.3 3.53 1.3
Low resolution limit 37.83 37.85 1.32
Completeness 98.4 99.7 96.5
Multiplicity 5.4 5.1 5.5
I/sigma 9.2 38.8 0.4
Rmerge 0.069 0.026 2.712
CC half 0.999 0.999 0.361
Anomalous completeness 96.5 96.9 94.2
Anomalous multiplicity 2.9 2.9 2.9
Cell 46.42 81.12 85.53 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.03324

Sweep:

SWEEP1

Files:

/programs/datagrid/737/TB_TTI0_B_2_####.cbf

Images:

1 - 1000

Beam:

(224.95, 212.35) -> (224.95, 212.35)

Distance:

196.64 -> 196.51

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.3 3.53 1.3
Low resolution limit 46.42 46.45 1.32
Completeness 98.4 99.7 96.7
Multiplicity 5.4 5.1 5.5
I/sigma 9.2 38.9 0.4
Rmerge 0.069 0.025 2.708
CC half 0.999 0.999 0.375
Anomalous completeness 96.5 96.9 94.7
Anomalous multiplicity 2.9 2.9 2.9
Cell 46.42 81.12 85.53 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.03324

Sweep:

SWEEP1

Files:

/programs/datagrid/737/TB_TTI0_B_2_####.cbf

Images:

1 - 1000

Beam:

(224.95, 212.35) -> (224.95, 212.34)

Distance:

196.64 -> 196.7

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.26 3.42 1.26
Low resolution limit 58.89 58.95 1.28
Completeness 98.2 100.0 93.8
Multiplicity 5.2 5.1 4.4
I/sigma 7.2 51.0 0.2
Rmerge 0.076 0.03 2.19
CC half 0.997 0.995 0.234
Anomalous completeness 96.8 99.7 90.5
Anomalous multiplicity 2.7 2.7 2.7
Cell 46.39 81.082 85.473 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.