Data DOI: 10.15785/SBGRID/736 | ID: 736
6SQX Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 14 Jul 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/736
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/736 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/736 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/736 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/736 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 736 ; shasum -c files.sha'
Storage requirements: 4.4G
Biological Sample:
Bacterial NlpC/P60 endopeptidase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
PROXIMA-1, SOLEIL
Data Creation Date:
12 Feb 2016
Related Datasets:
None
Lisboa, J; Pereira, PJB. 2020. "X-Ray Diffraction data for: Bacterial NlpC/P60 endopeptidase. PDB Code 6SQX", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/736.
X-Ray Diffraction data from Photobacterium damselae subsp. piscicida NlpC/P60 endopeptidase, source of 6SQX structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Johnny Lisboa | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97857
Sweep:
SWEEP1
Files:
/programs/datagrid/736/af6033_3_####.cbf
Images:
1 - 750
Beam:
(224.96, 202.94) -> (224.96, 203.1)
Distance:
244.6 -> 244.17
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.31 | 3.55 | 1.31 |
| Low resolution limit | 38.25 | 38.27 | 1.33 |
| Completeness | 99.2 | 99.9 | 88.6 |
| Multiplicity | 5.3 | 5.3 | 3.6 |
| I/sigma | 14.9 | 55.7 | 0.6 |
| Rmerge | 0.04 | 0.017 | 1.535 |
| CC half | 1.0 | 1.0 | 0.333 |
| Anomalous completeness | 96.2 | 96.5 | 72.0 |
| Anomalous multiplicity | 2.8 | 2.8 | 2.8 |
| Cell | 76.5 | 109.92 | 130.84 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97857
Sweep:
SWEEP1
Files:
/programs/datagrid/736/af6033_3_####.cbf
Images:
1 - 750
Beam:
(224.96, 202.94) -> (224.96, 203.09)
Distance:
244.6 -> 244.41
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.31 | 3.56 | 1.31 |
| Low resolution limit | 66.04 | 66.12 | 1.33 |
| Completeness | 99.2 | 99.9 | 88.6 |
| Multiplicity | 5.3 | 5.3 | 3.6 |
| I/sigma | 14.9 | 55.7 | 0.6 |
| Rmerge | 0.04 | 0.017 | 1.539 |
| CC half | 1.0 | 1.0 | 0.332 |
| Anomalous completeness | 96.2 | 96.4 | 72.0 |
| Anomalous multiplicity | 2.8 | 2.8 | 2.8 |
| Cell | 76.5 | 109.92 | 130.84 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97857
Sweep:
SWEEP1
Files:
/programs/datagrid/736/af6033_3_####.cbf
Images:
1 - 750
Beam:
(224.96, 202.94) -> (224.96, 203.1)
Distance:
244.6 -> 244.55
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.27 | 3.45 | 1.27 |
| Low resolution limit | 65.43 | 65.52 | 1.29 |
| Completeness | 97.4 | 100.0 | 74.9 |
| Multiplicity | 5.1 | 5.4 | 3.0 |
| I/sigma | 18.3 | 105.7 | 0.4 |
| Rmerge | 0.041 | 0.018 | 1.387 |
| CC half | 0.999 | 0.997 | 0.31 |
| Anomalous completeness | 93.7 | 99.7 | 55.1 |
| Anomalous multiplicity | 2.7 | 2.7 | 2.7 |
| Cell | 76.516 | 109.919 | 130.867 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
