X-Ray Diffraction data from PhnZ from uncultured HF130_AEPn_1, source of 4MLM structure

Data DOI: 10.15785/SBGRID/73 | ID: 73

Publication DOI: 10.1073/pnas.1320039111

4MLM Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Jia Laboratory, Queen's University

Release Date: May 11, 2015

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/73

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/73 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/73 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/73 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/73 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 73 ; shasum -c files.sha'

Storage requirements: 5.1G

Biological Sample:

PhnZ from uncultured HF130_AEPn_1

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

23-ID-B, GM/CA, APS, Chicago, IL

Data Creation Date:

Oct. 20, 2011

Related Datasets:

None


Cite this Dataset

van Staalduinen, LM; Jia, Z. 2015. "X-Ray Diffraction data for: PhnZ from uncultured HF130_AEPn_1. PDB Code 4MLM", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/73.

Download Citation

Dataset Description

SeMet Data set

Project Members

Name Additional Roles Affiliation While Working on the Project
Laura M van StaalduinenData Collector, DepositorQueen's University
Zongchao JiaPIQueen's University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97944

Sweep:

SWEEP1

Files:

/programs/datagrid/73/b9_3_E1.####

Images:

1 - 163

Beam:

(150.22, 149.78) -> (150.22, 149.93)

Distance:

174.7 -> 173.98

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.47 3.99 1.47
Low resolution limit 52.58 52.61 1.5
Completeness 100.0 100.0 100.0
Multiplicity 6.6 6.4 6.5
I/sigma 10.0 30.9 1.5
Rmerge 0.1 0.034 1.261
CC half 0.997 0.998 0.377
Anomalous completeness 99.9 99.9 99.5
Anomalous multiplicity 3.4 3.4 3.4
Cell 76.062 104.798 60.781 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97944

Sweep:

SWEEP1

Files:

/programs/datagrid/73/b9_3_E1.####

Images:

1 - 163

Beam:

(150.22, 149.78) -> (150.22, 149.83)

Distance:

174.7 -> 173.71

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.5 4.07 1.5
Low resolution limit 35.2 35.21 1.53
Completeness 100.0 100.0 99.9
Multiplicity 6.5 6.2 6.3
I/sigma 14.0 44.2 1.2
Rmerge 0.066 0.026 1.417
CC half 0.998 0.997 0.51
Anomalous completeness 99.1 98.6 99.2
Anomalous multiplicity 3.4 3.4 3.4
Cell 76.15 104.82 60.8 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97944

Sweep:

SWEEP1

Files:

/programs/datagrid/73/b9_3_E1.####

Images:

1 - 163

Beam:

(150.22, 149.78) -> (150.22, 149.83)

Distance:

174.7 -> 173.82

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.51 4.1 1.51
Low resolution limit 61.61 61.66 1.54
Completeness 100.0 100.0 100.0
Multiplicity 6.5 6.2 6.3
I/sigma 14.2 44.2 1.2
Rmerge 0.065 0.026 1.429
CC half 0.998 0.998 0.522
Anomalous completeness 99.1 98.5 99.3
Anomalous multiplicity 3.4 3.4 3.4
Cell 76.15 104.82 60.8 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97944

Sweep:

SWEEP1

Files:

/programs/datagrid/73/b9_3_E1.####

Images:

1 - 163

Beam:

(150.22, 149.78) -> (150.22, 149.91)

Distance:

174.7 -> 173.87

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.49 4.04 1.49
Low resolution limit 61.62 61.67 1.52
Completeness 99.9 100.0 97.2
Multiplicity 6.6 6.4 6.5
I/sigma 10.6 32.3 1.3
Rmerge 0.084 0.031 1.579
CC half 0.998 0.998 0.563
Anomalous completeness 99.9 99.9 97.2
Anomalous multiplicity 3.5 3.5 3.5
Cell 76.176 104.815 60.788 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.