Data DOI: 10.15785/SBGRID/719 | ID: 719
Publication DOI: 10.1016/j.celrep.2019.11.108
McCarthy Laboratory, EMBL - Grenoble
Release Date: 7 Jan 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/719
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/719 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/719 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/719 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/719 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 719 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
Human Nudt12
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
P13 at EMBL-Hamburg (PETRAIII)
Data Creation Date:
23 May 2019
Related Datasets:
None
McCarthy, AA.. 2020. "X-Ray Diffraction data for: Human Nudt12 .", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/719.
Human Nudt12 catalytic domain. Helical data collection (500 images total, 0.04s exposure, 0.1 degree osciallation)
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Andrew A. McCarthy | Data Collector, Depositor | EMBL-Grenoble |
| Andrew McCarthy | PI | EMBL - Grenoble |
Data processed with autoPROC pipeline incorporating STARANISO using all data
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97625
Sweep:
SWEEP1
Files:
/programs/datagrid/719/KM_C2_x2_1_#####.cbf
Images:
1 - 1800
Beam:
(215.09, 210.66) -> (215.09, 209.24)
Distance:
621.36 -> 621.59
Spacegroup:
P 62 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.18 | 8.63 | 3.18 |
| Low resolution limit | 76.15 | 76.17 | 3.23 |
| Completeness | 99.8 | 100.0 | 99.6 |
| Multiplicity | 19.8 | 15.8 | 20.7 |
| I/sigma | 4.8 | 20.6 | 0.4 |
| Rmerge | 0.489 | 0.095 | 8.63 |
| CC half | 0.997 | 0.998 | 0.334 |
| Anomalous completeness | 99.7 | 99.7 | 99.5 |
| Anomalous multiplicity | 10.5 | 10.5 | 10.5 |
| Cell | 234.69 | 234.69 | 459.97 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97625
Sweep:
SWEEP1
Files:
/programs/datagrid/719/KM_C2_x2_1_#####.cbf
Images:
1 - 1800
Beam:
(215.09, 210.66) -> (215.09, 209.23)
Distance:
621.36 -> 621.43
Spacegroup:
P 62 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.18 | 8.63 | 3.18 |
| Low resolution limit | 122.4 | 122.49 | 3.23 |
| Completeness | 99.8 | 100.0 | 99.6 |
| Multiplicity | 19.8 | 15.8 | 20.7 |
| I/sigma | 4.8 | 20.6 | 0.4 |
| Rmerge | 0.489 | 0.095 | 8.617 |
| CC half | 0.997 | 0.997 | 0.352 |
| Anomalous completeness | 99.7 | 99.6 | 99.4 |
| Anomalous multiplicity | 10.5 | 10.5 | 10.5 |
| Cell | 234.68 | 234.68 | 459.96 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Reprocessing failed.
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.