Data DOI: 10.15785/SBGRID/704 | ID: 704
Publication DOI: 10.1016/j.chembiol.2019.04.012
6E84 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Ferré-D'Amaré Laboratory, National Institutes of Health
Release Date: 20 Aug 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/704
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/704 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/704 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/704 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/704 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 704 ; shasum -c files.sha'
Storage requirements: 4.2G
Biological Sample:
RNA
Dataset Type:
X-Ray Diffraction
Subject Composition:
RNA
Collection Facility:
ALS 5.0.1
Data Creation Date:
28 Apr 2018
Related Datasets:
None
Sjekloca, L; Ferre D'Amare, A; Ferré-D'Amaré, A. 2019. "X-Ray Diffraction data for: RNA. PDB Code 6E84", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/704.
X-ray data diffraction
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Ljiljana Sjekloca | Data Collector, Depositor | NIH |
| Adrian Ferre D'Amare | NIH | |
| Adrian Ferré-D'Amaré | PI | National Institutes of Health |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97741
Sweep:
SWEEP1
Files:
/programs/datagrid/704/arf2p6_4_#####.cbf
Images:
1 - 720
Beam:
(223.94, 237.53) -> (223.94, 237.08)
Distance:
550.0 -> 557.86
Spacegroup:
H 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.79 | 7.5 | 2.79 |
| Low resolution limit | 24.29 | 24.29 | 2.84 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 19.8 | 18.2 | 19.6 |
| I/sigma | 17.5 | 83.4 | 0.3 |
| Rmerge | 0.122 | 0.023 | 13.999 |
| CC half | 1.0 | 1.0 | -0.043 |
| Anomalous completeness | 100.0 | 100.0 | 100.0 |
| Anomalous multiplicity | 10.4 | 10.4 | 10.4 |
| Cell | 128.53 | 128.53 | 40.78 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97741
Sweep:
SWEEP1
Files:
/programs/datagrid/704/arf2p6_4_#####.cbf
Images:
1 - 720
Beam:
(223.94, 237.53) -> (223.94, 237.11)
Distance:
550.0 -> 551.3
Spacegroup:
H 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.77 | 7.5 | 2.77 |
| Low resolution limit | 37.1 | 37.11 | 2.82 |
| Completeness | 100.0 | 99.5 | 100.0 |
| Multiplicity | 19.8 | 18.0 | 19.7 |
| I/sigma | 17.3 | 83.8 | 0.3 |
| Rmerge | 0.113 | 0.021 | 13.117 |
| CC half | 1.0 | 1.0 | 0.073 |
| Anomalous completeness | 99.9 | 99.3 | 100.0 |
| Anomalous multiplicity | 10.4 | 10.4 | 10.4 |
| Cell | 128.53 | 128.53 | 40.78 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97741
Sweep:
SWEEP1
Files:
/programs/datagrid/704/arf2p6_4_#####.cbf
Images:
1 - 720
Beam:
(223.94, 237.53) -> (223.94, 237.12)
Distance:
550.0 -> 552.47
Spacegroup:
R 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.76 | 7.49 | 2.76 |
| Low resolution limit | 64.48 | 64.5 | 2.81 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 19.5 | 17.9 | 19.5 |
| I/sigma | 17.5 | 129.6 | 0.1 |
| Rmerge | 0.097 | 0.017 | 18.26 |
| CC half | 1.0 | 1.0 | 0.154 |
| Anomalous completeness | 100.0 | 100.0 | 100.0 |
| Anomalous multiplicity | 10.2 | 10.2 | 10.2 |
| Cell | 128.958 | 128.958 | 40.878 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
