Data DOI: 10.15785/SBGRID/7 | ID: 7
Publication DOI: 10.1073/pnas.1407122111
4NWW Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Tao Laboratory, Rice University
Release Date: 20 Apr 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/7
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/7 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/7 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/7 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/7 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 7 ; shasum -c files.sha'
Storage requirements: 2.7G
Biological Sample:
Orsay virus capsid N-terminal deletion
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS BEAMLINE 21-ID-F
Data Creation Date:
20 Apr 2013
Related Datasets:
None
Guo, YR; Tao, Y. 2015. "X-Ray Diffraction data for: Orsay virus capsid N-terminal deletion . PDB Code 4NWW", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/7.
Collection temperature 100K Wavelength 0.97872Å
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Yusong R Guo | Data Collector, Depositor | Rice University |
| Yizhi (Jane) Tao | PI | Rice University |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/7/Yusong.####
Images:
301 - 450
Beam:
(112.46, 111.66) -> (112.46, 111.67)
Distance:
350.0 -> 351.49
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.61 | 9.79 | 3.61 |
| Low resolution limit | 63.02 | 63.03 | 3.67 |
| Completeness | 45.2 | 36.0 | 49.1 |
| Multiplicity | 1.4 | 1.7 | 1.3 |
| I/sigma | 3.2 | 14.6 | 0.8 |
| Rmerge | 0.224 | 0.037 | 0.829 |
| CC half | 0.933 | 0.983 | 0.333 |
| Anomalous completeness | 16.8 | 24.1 | 13.0 |
| Anomalous multiplicity | 1.0 | 1.0 | 1.0 |
| Cell | 555.854 | 404.65 | 373.85 | 90.0 | 132.117 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/7/Yusong.####
Images:
301 - 450
Beam:
(112.46, 111.66) -> (112.46, 111.68)
Distance:
350.0 -> 349.89
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.59 | 9.73 | 3.59 |
| Low resolution limit | 65.15 | 65.16 | 3.65 |
| Completeness | 25.1 | 19.6 | 27.4 |
| Multiplicity | 1.3 | 1.6 | 1.2 |
| I/sigma | 3.1 | 17.9 | 0.7 |
| Rmerge | 0.0 | 0.0 | 0.0 |
| CC half | 0.935 | 0.983 | 0.337 |
| Anomalous completeness | 7.7 | 12.3 | 5.3 |
| Anomalous multiplicity | 1.0 | 1.0 | 1.0 |
| Cell | 342.51 | 342.81 | 342.88 | 114.35 | 106.13 | 107.84 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97872
Sweep:
SWEEP1
Files:
/programs/datagrid/7/Yusong.####
Images:
301 - 450
Beam:
(112.46, 111.66) -> (112.46, 111.73)
Distance:
350.0 -> 351.31
Spacegroup:
I 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.26 | 11.54 | 4.26 |
| Low resolution limit | 65.98 | 65.99 | 4.33 |
| Completeness | 64.8 | 56.8 | 67.6 |
| Multiplicity | 2.0 | 2.2 | 1.9 |
| I/sigma | 7.2 | 26.8 | 3.0 |
| Rmerge | 0.168 | 0.086 | 0.301 |
| CC half | 0.911 | 0.915 | 0.843 |
| Anomalous completeness | 37.8 | 45.3 | 35.1 |
| Anomalous multiplicity | 1.3 | 1.3 | 1.3 |
| Cell | 375.186 | 404.909 | 413.268 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
