Data DOI: 10.15785/SBGRID/69 | ID: 69
Publication DOI: 10.1126/science.1261093
4XLW Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 8 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/69
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/69 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/69 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/69 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/69 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 69 ; shasum -c files.sha'
Storage requirements: 3.2G
Biological Sample:
Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF2)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ALS beamline 8.2.2
Data Creation Date:
12 Apr 2014
Related Datasets:
None
Jude, KM; Garcia, KC; Luca, VC; Garcia, K. 2015. "X-Ray Diffraction data for: Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF2) . PDB Code 4XLW", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/69.
Native dataset of Notch bound to Delta-like 4
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Depositor | Stanford University |
| K C Garcia | Stanford University | |
| Vincent C Luca | Data Collector | Stanford University |
| K. Christopher Garcia | PI | Stanford University |
processed with XDS to 3.4 Å resolution
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99996
Sweep:
SWEEP1
Files:
/programs/datagrid/69/2egf_1_###.img
Images:
1 - 180
Beam:
(155.1, 163.45) -> (155.1, 163.22)
Distance:
350.0 -> 352.2
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.27 | 8.87 | 3.27 |
| Low resolution limit | 84.05 | 84.07 | 3.33 |
| Completeness | 99.3 | 95.9 | 99.9 |
| Multiplicity | 3.7 | 3.5 | 3.7 |
| I/sigma | 5.1 | 19.4 | 0.6 |
| Rmerge | 0.182 | 0.03 | 2.017 |
| CC half | 0.997 | 0.999 | 0.318 |
| Anomalous completeness | 94.7 | 87.5 | 96.7 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 84.54 | 95.57 | 122.89 | 90.0 | 96.19 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99996
Sweep:
SWEEP1
Files:
/programs/datagrid/69/2egf_1_###.img
Images:
1 - 180
Beam:
(155.1, 163.45) -> (155.1, 163.22)
Distance:
350.0 -> 350.75
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.27 | 8.87 | 3.27 |
| Low resolution limit | 95.57 | 95.61 | 3.33 |
| Completeness | 99.3 | 95.8 | 99.7 |
| Multiplicity | 3.7 | 3.5 | 3.7 |
| I/sigma | 5.1 | 19.3 | 0.6 |
| Rmerge | 0.182 | 0.031 | 1.969 |
| CC half | 0.997 | 0.999 | 0.33 |
| Anomalous completeness | 94.7 | 88.1 | 96.4 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 84.54 | 95.57 | 122.9 | 90.0 | 96.19 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99996
Sweep:
SWEEP1
Files:
/programs/datagrid/69/2egf_1_###.img
Images:
1 - 180
Beam:
(155.1, 163.45) -> (155.1, 163.23)
Distance:
350.0 -> 348.21
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.15 | 8.55 | 3.15 |
| Low resolution limit | 95.02 | 95.07 | 3.21 |
| Completeness | 100.0 | 100.0 | 98.4 |
| Multiplicity | 3.8 | 3.7 | 3.8 |
| I/sigma | 2.7 | 24.5 | 0.1 |
| Rmerge | 0.248 | 0.06 | 4.569 |
| CC half | 0.985 | 0.987 | 0.175 |
| Anomalous completeness | 99.3 | 100.0 | 98.0 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 83.981 | 95.024 | 122.309 | 90.0 | 96.312 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
