Data DOI: 10.15785/SBGRID/689 | ID: 689
Publication DOI: 10.1073/pnas.1818631116
6ONB Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Ozkan Laboratory, University of Chicago
Release Date: 6 Dec 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/689
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/689 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/689 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/689 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/689 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 689 ; shasum -c files.sha'
Storage requirements: 5.6G
Biological Sample:
C. elegans ZIG-8 IG1-RIG-5 IG1 heterodimer, monoclinic form
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline 24-ID-C, NE-CAT, APS, Chicago, IL
Data Creation Date:
27 Feb 2019
Related Datasets:
None
Cheng, S; Kurleto, JD; Ozkan, E. 2019. "X-Ray Diffraction data for: C. elegans ZIG-8 IG1-RIG-5 IG1 heterodimer, monoclinic form. PDB Code 6ONB", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/689.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Shouqiang Cheng | Data Collector | University of Chicago |
| Justyna D Kurleto | Data Collector | University of Chicago |
| Engin Ozkan | Data Collector, Depositor, PI | University of Chicago |
Data processed easily with parameters in image headers. The refined values of ORGX, ORGY and detector distance are 1302.1, 1275.0, 300.21, respectively, post-processing.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/689/B_7_1_####.cbf
Images:
1 - 950
Beam:
(217.17, 225.37) -> (217.17, 225.42)
Distance:
300.0 -> 300.53
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.57 | 4.25 | 1.57 |
| Low resolution limit | 24.42 | 24.43 | 1.6 |
| Completeness | 96.3 | 97.2 | 92.8 |
| Multiplicity | 3.6 | 3.6 | 3.3 |
| I/sigma | 9.8 | 28.9 | 0.6 |
| Rmerge | 0.049 | 0.027 | 1.775 |
| CC half | 0.998 | 0.998 | 0.279 |
| Anomalous completeness | 87.6 | 91.5 | 80.4 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 87.42 | 79.07 | 89.93 | 90.0 | 94.22 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/689/B_7_1_####.cbf
Images:
1 - 950
Beam:
(217.17, 225.37) -> (217.17, 225.38)
Distance:
300.0 -> 300.36
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.57 | 4.26 | 1.57 |
| Low resolution limit | 58.57 | 58.61 | 1.6 |
| Completeness | 96.3 | 97.1 | 92.8 |
| Multiplicity | 3.6 | 3.6 | 3.3 |
| I/sigma | 9.8 | 28.9 | 0.6 |
| Rmerge | 0.049 | 0.027 | 1.751 |
| CC half | 0.998 | 0.998 | 0.288 |
| Anomalous completeness | 87.6 | 91.4 | 80.3 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 87.42 | 79.08 | 89.94 | 90.0 | 94.22 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/689/B_7_1_####.cbf
Images:
1 - 950
Beam:
(217.17, 225.37) -> (217.17, 225.38)
Distance:
300.0 -> 300.64
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.55 | 4.22 | 1.55 |
| Low resolution limit | 90.02 | 90.17 | 1.58 |
| Completeness | 96.3 | 97.9 | 83.6 |
| Multiplicity | 3.6 | 3.7 | 3.1 |
| I/sigma | 10.4 | 60.8 | 0.2 |
| Rmerge | 0.058 | 0.028 | 1.609 |
| CC half | 0.998 | 0.998 | 0.316 |
| Anomalous completeness | 90.4 | 96.6 | 68.6 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 87.779 | 79.39 | 90.266 | 90.0 | 94.219 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
