Data DOI: 10.15785/SBGRID/684 | ID: 684
Publication DOI: 10.1093/bioinformatics/btz496
Bonvin Laboratory, Utrecht University
Release Date: 9 Jul 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/684
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/684 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/684 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/684 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/684 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 684 ; shasum -c files.sha'
Storage requirements: 24G
Biological Sample:
Docking models for Docking Benchmark 4, 5 and CAPRI score_set
Dataset Type:
Structural Model
Subject Composition:
Protein
Collection Facility:
N.A.
Data Creation Date:
1 Jun 2017
Related Datasets:
None
Geng, C; Xue, LC.; Bonvin, A. 2019. "Docking models for Docking Benchmark 4, 5 and CAPRI score_set.", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/684.
HADDOCK docking models for Protein-Protein Docking Benchmark 4; HADDOCK, pyDock, SwarmDock and ZDock docking models for new complexes of Docking Benchmark 5; Various docking models for CAPRI score_set. All of the non-HADDOCK models are refined with HADDOCK using energy minimisation.
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Cunliang Geng | Data Collector, Depositor | Utrecht University |
| Li C. Xue | Data Collector | Utrecht University |
| Alexandre Bonvin | Data Collector, PI | Utrecht University |
none
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.