Data DOI: 10.15785/SBGRID/681 | ID: 681
6PB3 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 20 Dec 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/681
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/681 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/681 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/681 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/681 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 681 ; shasum -c files.sha'
Storage requirements: 16G
Biological Sample:
Rhizobiales Pch2
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24ID-E
Data Creation Date:
11 Nov 2018
Related Datasets:
None
Ye, Q; Corbett, KD. 2019. "X-Ray Diffraction data for: Rhizobiales Pch2. PDB Code 6PB3", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/681.
SAD dataset with selenomethionine-derivatized protein. One chain in AU; P6 symmetry reconstructs homo-hexamer
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin D Corbett | Depositor | UC San Diego |
| Qiaozhen Ye | Data Collector | UC San Diego |
| Kevin Corbett | PI | University of California, San Diego |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/681/14_16_1_######.cbf
Images:
1 - 900
Beam:
(164.11, 154.41) -> (164.11, 154.47)
Distance:
300.0 -> 299.61
Spacegroup:
P 6
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.97 | 5.34 | 1.97 |
| Low resolution limit | 43.47 | 43.48 | 2.0 |
| Completeness | 98.9 | 98.8 | 95.5 |
| Multiplicity | 10.5 | 9.8 | 10.5 |
| I/sigma | 16.4 | 54.3 | 0.6 |
| Rmerge | 0.051 | 0.027 | 2.936 |
| CC half | 0.999 | 0.999 | 0.349 |
| Anomalous completeness | 98.5 | 96.8 | 95.7 |
| Anomalous multiplicity | 5.4 | 5.4 | 5.4 |
| Cell | 100.39 | 100.39 | 48.83 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/681/14_16_1_######.cbf
Images:
1 - 900
Beam:
(164.11, 154.41) -> (164.11, 154.46)
Distance:
300.0 -> 299.77
Spacegroup:
P 6
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.97 | 5.35 | 1.97 |
| Low resolution limit | 86.94 | 87.03 | 2.0 |
| Completeness | 98.9 | 98.7 | 95.5 |
| Multiplicity | 10.5 | 9.8 | 10.5 |
| I/sigma | 16.4 | 54.3 | 0.6 |
| Rmerge | 0.051 | 0.027 | 2.941 |
| CC half | 0.999 | 0.999 | 0.336 |
| Anomalous completeness | 98.5 | 96.4 | 95.7 |
| Anomalous multiplicity | 5.4 | 5.4 | 5.4 |
| Cell | 100.39 | 100.39 | 48.83 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/681/14_16_1_######.cbf
Images:
1 - 900
Beam:
(164.11, 154.41) -> (164.11, 154.46)
Distance:
300.0 -> 298.7
Spacegroup:
P 6
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.92 | 5.22 | 1.92 |
| Low resolution limit | 86.47 | 86.56 | 1.96 |
| Completeness | 97.9 | 98.9 | 82.1 |
| Multiplicity | 10.5 | 10.0 | 9.5 |
| I/sigma | 11.7 | 69.2 | 0.1 |
| Rmerge | 0.065 | 0.026 | 2.776 |
| CC half | 0.999 | 1.0 | 0.28 |
| Anomalous completeness | 97.9 | 97.0 | 85.4 |
| Anomalous multiplicity | 5.4 | 5.4 | 5.4 |
| Cell | 99.844 | 99.844 | 48.574 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
