X-Ray Diffraction data from P. aeruginosa ATCC27853 HORMA1:HORMA2:Peptide 1 complex, source of 6P8S structure

Data DOI: 10.15785/SBGRID/678 | ID: 678

6P8S Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 20 Dec 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/678

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/678 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/678 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/678 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/678 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 678 ; shasum -c files.sha'

Storage requirements: 7.9G

Biological Sample:

P. aeruginosa ATCC27853 HORMA1:HORMA2:Peptide 1 complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL 9-2

Data Creation Date:

28 Apr 2019

Related Datasets:

None


Cite this Dataset

Ye, Q; Corbett, KD. 2019. "X-Ray Diffraction data for: P. aeruginosa ATCC27853 HORMA1:HORMA2:Peptide 1 complex. PDB Code 6P8S", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/678.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorUC San Diego
Qiaozhen YeData CollectorUC San Diego
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/678/F7_1_#####.cbf

Images:

1 - 1350

Beam:

(217.32, 211.82) -> (217.32, 211.56)

Distance:

450.0 -> 450.26

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.93 5.24 1.93
Low resolution limit 45.79 45.8 1.96
Completeness 92.4 99.9 58.3
Multiplicity 9.4 9.6 6.0
I/sigma 8.3 28.0 0.5
Rmerge 0.189 0.058 2.345
CC half 0.996 0.999 0.33
Anomalous completeness 92.4 99.8 58.9
Anomalous multiplicity 4.9 4.9 4.9
Cell 100.88 124.54 109.15 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/678/F7_1_#####.cbf

Images:

1 - 1350

Beam:

(217.32, 211.82) -> (217.32, 211.56)

Distance:

450.0 -> 450.4

Spacegroup:

C 2 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.93 5.24 1.93
Low resolution limit 50.44 50.46 1.96
Completeness 92.4 99.9 58.3
Multiplicity 9.4 9.6 6.0
I/sigma 8.3 27.9 0.5
Rmerge 0.189 0.058 2.344
CC half 0.996 0.999 0.33
Anomalous completeness 92.4 99.8 58.9
Anomalous multiplicity 4.9 4.9 4.9
Cell 100.88 124.54 109.14 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/678/F7_1_#####.cbf

Images:

1 - 1350

Beam:

(217.32, 211.82) -> (217.32, 211.56)

Distance:

450.0 -> 450.05

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.85 5.02 1.85
Low resolution limit 54.53 54.56 1.88
Completeness 85.1 98.8 39.0
Multiplicity 4.8 5.2 3.2
I/sigma 7.6 29.8 0.4
Rmerge 0.152 0.054 1.7
CC half 0.985 0.998 0.176
Anomalous completeness 84.0 98.2 37.7
Anomalous multiplicity 2.4 2.4 2.4
Cell 100.816 124.498 109.068 90.0 90.012 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.