Data DOI: 10.15785/SBGRID/677 | ID: 677
6P8R Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 20 Dec 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/677
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/677 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/677 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/677 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/677 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 677 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
P. aeruginosa ATCC27853 HORMA2
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
SSRL 9-2
Data Creation Date:
10 Apr 2018
Related Datasets:
Ye, Q; Corbett, KD. 2019. "X-Ray Diffraction data for: P. aeruginosa ATCC27853 HORMA2. PDB Code 6P8R", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/677.
Selenomethionine-derivatized SAD dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin D Corbett | Depositor | UC San Diego |
| Qiaozhen Ye | Data Collector | UC San Diego |
| Kevin Corbett | PI | University of California, San Diego |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/677/E6_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.74)
Distance:
400.0 -> 398.61
Spacegroup:
P 41
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.49 | 6.74 | 2.49 |
| Low resolution limit | 33.44 | 33.45 | 2.53 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 13.6 | 13.3 | 14.0 |
| I/sigma | 19.3 | 79.7 | 0.6 |
| Rmerge | 0.093 | 0.02 | 3.776 |
| CC half | 1.0 | 1.0 | 0.218 |
| Anomalous completeness | 99.9 | 100.0 | 99.9 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 105.81 | 105.81 | 74.65 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/677/E6_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.74)
Distance:
400.0 -> 399.25
Spacegroup:
P 41
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.52 | 6.83 | 2.52 |
| Low resolution limit | 39.97 | 39.97 | 2.56 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 13.6 | 13.2 | 14.0 |
| I/sigma | 20.0 | 80.2 | 0.8 |
| Rmerge | 0.09 | 0.019 | 3.178 |
| CC half | 1.0 | 1.0 | 0.333 |
| Anomalous completeness | 99.9 | 100.0 | 99.9 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 105.81 | 105.81 | 74.65 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/677/E6_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.74)
Distance:
400.0 -> 399.46
Spacegroup:
P 41
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.29 | 6.21 | 2.29 |
| Low resolution limit | 47.31 | 47.32 | 2.33 |
| Completeness | 100.0 | 100.0 | 99.9 |
| Multiplicity | 13.7 | 13.4 | 12.7 |
| I/sigma | 17.0 | 101.2 | 0.3 |
| Rmerge | 0.107 | 0.022 | 4.432 |
| CC half | 0.999 | 1.0 | 0.159 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 7.0 | 7.0 | 7.0 |
| Cell | 105.784 | 105.784 | 74.624 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
