X-Ray Diffraction data from P. aeruginosa ATCC27853 CdnD D62N/D64N mutant, ATP-bound, source of 6P8J structure

Data DOI: 10.15785/SBGRID/671 | ID: 671

6P8J Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 20 Dec 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/671

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/671 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/671 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/671 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/671 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 671 ; shasum -c files.sha'

Storage requirements: 16G

Biological Sample:

P. aeruginosa ATCC27853 CdnD D62N/D64N mutant, ATP-bound

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24ID-E

Data Creation Date:

28 Oct 2017

Related Datasets:

None


Cite this Dataset

Ye, Q; Corbett, KD. 2019. "X-Ray Diffraction data for: P. aeruginosa ATCC27853 CdnD D62N/D64N mutant, ATP-bound. PDB Code 6P8J", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/671.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorUC San Diego
Qiaozhen YeData CollectorUC San Diego
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/671/13_12_2_######.cbf

Images:

1 - 900

Beam:

(163.9, 154.98) -> (163.9, 154.75)

Distance:

160.0 -> 159.26

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.34 3.64 1.34
Low resolution limit 40.9 40.92 1.36
Completeness 100.0 100.0 99.9
Multiplicity 6.6 6.0 6.7
I/sigma 7.2 17.1 1.0
Rmerge 0.145 0.082 1.805
CC half 0.991 0.982 0.331
Anomalous completeness 99.3 98.2 98.8
Anomalous multiplicity 3.5 3.5 3.5
Cell 151.29 46.23 87.74 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/671/13_12_2_######.cbf

Images:

1 - 900

Beam:

(163.9, 154.98) -> (163.9, 154.74)

Distance:

160.0 -> 159.27

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.34 3.64 1.34
Low resolution limit 75.91 76.03 1.36
Completeness 100.0 100.0 99.9
Multiplicity 6.6 6.0 6.7
I/sigma 7.2 17.1 1.0
Rmerge 0.145 0.082 1.814
CC half 0.991 0.983 0.32
Anomalous completeness 99.3 98.2 98.8
Anomalous multiplicity 3.5 3.5 3.5
Cell 151.3 46.24 87.75 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP1

Files:

/programs/datagrid/671/13_12_2_######.cbf

Images:

1 - 900

Beam:

(163.9, 154.98) -> (163.9, 154.74)

Distance:

160.0 -> 159.56

Spacegroup:

P 21 2 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.38 3.75 1.38
Low resolution limit 87.88 88.06 1.4
Completeness 99.9 100.0 97.7
Multiplicity 6.7 6.6 6.7
I/sigma 3.6 23.9 0.2
Rmerge 0.25 0.111 3.659
CC half 0.988 0.984 0.033
Anomalous completeness 99.6 99.9 96.9
Anomalous multiplicity 3.5 3.5 3.5
Cell 46.293 87.878 151.429 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.