X-Ray Diffraction data from P. aeruginosa ATCC27853 CdnD, Apo form 1, source of 6P82 structure

Data DOI: 10.15785/SBGRID/670 | ID: 670

6P82 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 20 Dec 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/670

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/670 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/670 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/670 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/670 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 670 ; shasum -c files.sha'

Storage requirements: 5.3G

Biological Sample:

P. aeruginosa ATCC27853 CdnD, Apo form 1

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24ID-C

Data Creation Date:

23 Aug 2017

Related Datasets:

None


Cite this Dataset

Ye, Q; Corbett, KD. 2019. "X-Ray Diffraction data for: P. aeruginosa ATCC27853 CdnD, Apo form 1. PDB Code 6P82", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/670.

Download Citation

Dataset Description

Single-wavelength anomalous dataset (selenomethionine)

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorUC San Diego
Qiaozhen YeData CollectorUC San Diego
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP1

Files:

/programs/datagrid/670/10_2_1_####.cbf

Images:

1 - 900

Beam:

(216.75, 223.03) -> (216.75, 223.08)

Distance:

400.0 -> 399.97

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.04 5.53 2.04
Low resolution limit 37.75 37.75 2.08
Completeness 100.0 100.0 99.9
Multiplicity 6.7 6.5 6.7
I/sigma 9.9 26.3 1.0
Rmerge 0.13 0.041 2.561
CC half 0.997 0.998 0.304
Anomalous completeness 98.9 99.4 98.2
Anomalous multiplicity 3.5 3.5 3.5
Cell 117.38 147.79 104.57 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP1

Files:

/programs/datagrid/670/10_2_1_####.cbf

Images:

1 - 900

Beam:

(216.75, 223.03) -> (216.75, 223.08)

Distance:

400.0 -> 400.37

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.04 5.54 2.04
Low resolution limit 91.91 92.0 2.08
Completeness 100.0 100.0 99.9
Multiplicity 6.7 6.5 6.7
I/sigma 9.9 26.3 1.0
Rmerge 0.129 0.041 2.526
CC half 0.997 0.998 0.291
Anomalous completeness 98.9 99.4 98.2
Anomalous multiplicity 3.5 3.5 3.5
Cell 117.37 147.79 104.57 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9792

Sweep:

SWEEP1

Files:

/programs/datagrid/670/10_2_1_####.cbf

Images:

1 - 900

Beam:

(216.75, 223.03) -> (216.75, 223.07)

Distance:

400.0 -> 400.46

Spacegroup:

P 2 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.98 5.37 1.98
Low resolution limit 147.92 148.33 2.01
Completeness 99.9 100.0 97.5
Multiplicity 6.7 6.5 6.4
I/sigma 5.9 24.7 0.3
Rmerge 0.141 0.055 2.028
CC half 0.995 0.995 0.411
Anomalous completeness 99.5 99.9 96.6
Anomalous multiplicity 3.5 3.5 3.5
Cell 104.663 117.425 147.918 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.