Data DOI: 10.15785/SBGRID/670 | ID: 670
6P82 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 20 Dec 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/670
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/670 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/670 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/670 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/670 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 670 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
P. aeruginosa ATCC27853 CdnD, Apo form 1
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24ID-C
Data Creation Date:
23 Aug 2017
Related Datasets:
None
Ye, Q; Corbett, KD. 2019. "X-Ray Diffraction data for: P. aeruginosa ATCC27853 CdnD, Apo form 1. PDB Code 6P82", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/670.
Single-wavelength anomalous dataset (selenomethionine)
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin D Corbett | Depositor | UC San Diego |
| Qiaozhen Ye | Data Collector | UC San Diego |
| Kevin Corbett | PI | University of California, San Diego |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/670/10_2_1_####.cbf
Images:
1 - 900
Beam:
(216.75, 223.03) -> (216.75, 223.08)
Distance:
400.0 -> 399.97
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.04 | 5.53 | 2.04 |
| Low resolution limit | 37.75 | 37.75 | 2.08 |
| Completeness | 100.0 | 100.0 | 99.9 |
| Multiplicity | 6.7 | 6.5 | 6.7 |
| I/sigma | 9.9 | 26.3 | 1.0 |
| Rmerge | 0.13 | 0.041 | 2.561 |
| CC half | 0.997 | 0.998 | 0.304 |
| Anomalous completeness | 98.9 | 99.4 | 98.2 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 117.38 | 147.79 | 104.57 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/670/10_2_1_####.cbf
Images:
1 - 900
Beam:
(216.75, 223.03) -> (216.75, 223.08)
Distance:
400.0 -> 400.37
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.04 | 5.54 | 2.04 |
| Low resolution limit | 91.91 | 92.0 | 2.08 |
| Completeness | 100.0 | 100.0 | 99.9 |
| Multiplicity | 6.7 | 6.5 | 6.7 |
| I/sigma | 9.9 | 26.3 | 1.0 |
| Rmerge | 0.129 | 0.041 | 2.526 |
| CC half | 0.997 | 0.998 | 0.291 |
| Anomalous completeness | 98.9 | 99.4 | 98.2 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 117.37 | 147.79 | 104.57 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/670/10_2_1_####.cbf
Images:
1 - 900
Beam:
(216.75, 223.03) -> (216.75, 223.07)
Distance:
400.0 -> 400.46
Spacegroup:
P 2 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.98 | 5.37 | 1.98 |
| Low resolution limit | 147.92 | 148.33 | 2.01 |
| Completeness | 99.9 | 100.0 | 97.5 |
| Multiplicity | 6.7 | 6.5 | 6.4 |
| I/sigma | 5.9 | 24.7 | 0.3 |
| Rmerge | 0.141 | 0.055 | 2.028 |
| CC half | 0.995 | 0.995 | 0.411 |
| Anomalous completeness | 99.5 | 99.9 | 96.6 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 104.663 | 117.425 | 147.918 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
