Data DOI: 10.15785/SBGRID/664 | ID: 664
6P7O Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 20 Dec 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/664
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/664 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/664 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/664 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/664 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 664 ; shasum -c files.sha'
Storage requirements: 1.4G
Biological Sample:
E. coli MS115-1 NucC, Apo form
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
SSRL 14-1
Data Creation Date:
12 Jan 2017
Related Datasets:
Berg, KR; Corbett, KD. 2019. "X-Ray Diffraction data for: E. coli MS115-1 NucC, Apo form. PDB Code 6P7O", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/664.
Native diffraction data
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin D Corbett | Depositor | UC San Diego |
| Kyle R Berg | Data Collector | UC San Diego |
| Kevin Corbett | PI | University of California, San Diego |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.19499
Sweep:
SWEEP1
Files:
/programs/datagrid/664/A1_1_#####.mccd
Images:
1 - 40
Beam:
(162.5, 162.5) -> (162.5, 162.3)
Distance:
200.0 -> 200.6
Spacegroup:
F 41 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.72 | 4.67 | 1.72 |
| Low resolution limit | 62.98 | 63.02 | 1.75 |
| Completeness | 100.0 | 100.0 | 98.8 |
| Multiplicity | 9.1 | 8.6 | 6.2 |
| I/sigma | 20.7 | 61.4 | 0.9 |
| Rmerge | 0.049 | 0.022 | 1.757 |
| CC half | 0.999 | 0.999 | 0.362 |
| Anomalous completeness | 99.9 | 100.0 | 98.6 |
| Anomalous multiplicity | 4.9 | 4.9 | 4.9 |
| Cell | 208.88 | 208.88 | 208.88 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.19499
Sweep:
SWEEP1
Files:
/programs/datagrid/664/A1_1_#####.mccd
Images:
1 - 40
Beam:
(162.5, 162.5) -> (162.5, 162.3)
Distance:
200.0 -> 200.75
Spacegroup:
F 41 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.72 | 4.67 | 1.72 |
| Low resolution limit | 62.98 | 63.02 | 1.75 |
| Completeness | 100.0 | 100.0 | 98.8 |
| Multiplicity | 9.1 | 8.6 | 6.2 |
| I/sigma | 20.7 | 61.4 | 0.9 |
| Rmerge | 0.049 | 0.022 | 1.761 |
| CC half | 0.999 | 0.999 | 0.377 |
| Anomalous completeness | 99.9 | 100.0 | 98.7 |
| Anomalous multiplicity | 4.9 | 4.9 | 4.9 |
| Cell | 208.88 | 208.88 | 208.88 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.19499
Sweep:
SWEEP1
Files:
/programs/datagrid/664/A1_1_#####.mccd
Images:
1 - 40
Beam:
(162.5, 162.5) -> (162.5, 162.38)
Distance:
200.0 -> 201.42
Spacegroup:
F 41 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.66 | 4.5 | 1.66 |
| Low resolution limit | 35.44 | 35.45 | 1.69 |
| Completeness | 99.3 | 100.0 | 92.3 |
| Multiplicity | 8.8 | 8.9 | 4.5 |
| I/sigma | 17.6 | 81.3 | 1.2 |
| Rmerge | 0.077 | 0.024 | 0.929 |
| CC half | 0.953 | 0.997 | 0.224 |
| Anomalous completeness | 99.0 | 100.0 | 89.0 |
| Anomalous multiplicity | 4.7 | 4.7 | 4.7 |
| Cell | 209.667 | 209.667 | 209.667 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
