Data DOI: 10.15785/SBGRID/660 | ID: 660
Publication DOI: 10.1038/s41594-019-0224-z
6NE4 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 24 May 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/660
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/660 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/660 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/660 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/660 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 660 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
Designed repeat protein specifically in complex with Fz7CRD
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
SSRL beamline 12-2
Data Creation Date:
23 Jul 2017
Related Datasets:
None
Jude, KM; Garcia, KC; Miao, Y; Garcia, K. 2019. "X-Ray Diffraction data for: Designed repeat protein specifically in complex with Fz7CRD. PDB Code 6NE4", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/660.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | Stanford University/HHMI |
| K C Garcia | Stanford University/HHMI | |
| Yi Miao | Stanford University | |
| K. Christopher Garcia | PI | Stanford University |
images were processed with XDS and reflections merged with aimless
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/660/B2_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.83)
Distance:
500.0 -> 496.26
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.3 | 6.21 | 2.3 |
| Low resolution limit | 23.97 | 23.97 | 2.34 |
| Completeness | 100.0 | 100.0 | 98.8 |
| Multiplicity | 6.2 | 5.4 | 4.4 |
| I/sigma | 8.1 | 23.8 | 0.7 |
| Rmerge | 0.147 | 0.05 | 1.784 |
| CC half | 0.996 | 0.997 | 0.369 |
| Anomalous completeness | 98.7 | 98.8 | 94.0 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 39.07 | 63.48 | 103.46 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/660/B2_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.86)
Distance:
500.0 -> 493.61
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.3 | 6.23 | 2.3 |
| Low resolution limit | 36.2 | 36.21 | 2.34 |
| Completeness | 100.0 | 100.0 | 99.3 |
| Multiplicity | 6.2 | 5.3 | 4.7 |
| I/sigma | 7.8 | 22.9 | 0.7 |
| Rmerge | 0.156 | 0.051 | 2.003 |
| CC half | 0.995 | 0.997 | 0.383 |
| Anomalous completeness | 98.9 | 98.8 | 96.4 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 38.69 | 62.91 | 102.67 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/660/B2_1_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.86)
Distance:
500.0 -> 498.45
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.21 | 5.99 | 2.21 |
| Low resolution limit | 36.53 | 36.53 | 2.25 |
| Completeness | 99.6 | 100.0 | 94.9 |
| Multiplicity | 6.0 | 5.6 | 3.5 |
| I/sigma | 7.6 | 30.6 | 0.4 |
| Rmerge | 0.155 | 0.065 | 1.59 |
| CC half | 0.995 | 0.996 | 0.215 |
| Anomalous completeness | 97.9 | 99.8 | 85.0 |
| Anomalous multiplicity | 3.3 | 3.3 | 3.3 |
| Cell | 39.04 | 63.468 | 103.516 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
