Data DOI: 10.15785/SBGRID/659 | ID: 659
Publication DOI: 10.1038/s41594-019-0224-z
6NE2 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 24 May 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/659
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/659 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/659 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/659 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/659 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 659 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
Designed repeat protein in complex with Fz7
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS beamline 23ID-D
Data Creation Date:
17 Dec 2016
Related Datasets:
None
Jude, KM; Garcia, KC; Miao, Y; Garcia, K. 2019. "X-Ray Diffraction data for: Designed repeat protein in complex with Fz7. PDB Code 6NE2", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/659.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | Stanford University/HHMI |
| K C Garcia | Stanford University/HHMI | |
| Yi Miao | Stanford University | |
| K. Christopher Garcia | PI | Stanford University |
data were processed with fastdp
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.03324
Sweep:
SWEEP1
Files:
/programs/datagrid/659/A1_2_#####.cbf
Images:
1 - 1088
Beam:
(221.88, 212.59) -> (221.88, 213.7)
Distance:
238.4 -> 237.69
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.28 | 3.47 | 1.28 |
| Low resolution limit | 39.19 | 39.2 | 1.3 |
| Completeness | 98.6 | 100.0 | 81.5 |
| Multiplicity | 6.8 | 7.5 | 2.8 |
| I/sigma | 14.4 | 41.1 | 0.8 |
| Rmerge | 0.051 | 0.034 | 1.087 |
| CC half | 0.999 | 0.999 | 0.359 |
| Anomalous completeness | 95.2 | 99.7 | 61.7 |
| Anomalous multiplicity | 3.6 | 3.6 | 3.6 |
| Cell | 68.04 | 86.44 | 57.6 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.03324
Sweep:
SWEEP1
Files:
/programs/datagrid/659/A1_2_#####.cbf
Images:
1 - 1088
Beam:
(221.88, 212.59) -> (221.88, 213.68)
Distance:
238.4 -> 238.07
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.28 | 3.47 | 1.28 |
| Low resolution limit | 47.93 | 47.97 | 1.3 |
| Completeness | 98.6 | 100.0 | 81.5 |
| Multiplicity | 6.8 | 7.5 | 2.8 |
| I/sigma | 14.4 | 41.1 | 0.8 |
| Rmerge | 0.051 | 0.034 | 1.085 |
| CC half | 0.999 | 0.999 | 0.369 |
| Anomalous completeness | 95.2 | 99.7 | 61.6 |
| Anomalous multiplicity | 3.6 | 3.6 | 3.6 |
| Cell | 68.04 | 86.44 | 57.6 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.03324
Sweep:
SWEEP1
Files:
/programs/datagrid/659/A1_2_#####.cbf
Images:
1 - 1088
Beam:
(221.88, 212.59) -> (221.88, 213.68)
Distance:
238.4 -> 237.99
Spacegroup:
P 2 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.21 | 3.28 | 1.21 |
| Low resolution limit | 53.46 | 53.51 | 1.23 |
| Completeness | 91.9 | 100.0 | 38.4 |
| Multiplicity | 6.4 | 7.6 | 2.1 |
| I/sigma | 12.6 | 58.2 | 0.3 |
| Rmerge | 0.058 | 0.037 | 1.104 |
| CC half | 0.999 | 0.999 | 0.314 |
| Anomalous completeness | 85.7 | 100.0 | 21.7 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 57.584 | 68.047 | 86.418 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
