X-Ray Diffraction data from Chicken egg white lysozyme, source of 6RT3 structure

Data DOI: 10.15785/SBGRID/656 | ID: 656

Publication DOI: 10.1039/D0CP02469D

6RT3 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: May 24, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/656

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/656 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/656 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/656 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/656 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 656 ; shasum -c files.sha'

Storage requirements: 2.2G

Biological Sample:

Chicken egg white lysozyme

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ESRF ID29

Data Creation Date:

April 21, 2006

Related Datasets:

655


Cite this Dataset

Pereira, PJB. 2019. "X-Ray Diffraction data for: Chicken egg white lysozyme. PDB Code 6RT3", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/656.

Download Citation

Dataset Description

High resolution pass

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro JB PereiraData Collector, DepositorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9795

Sweep:

SWEEP1

Files:

/programs/datagrid/656/teste_5_###.img

Images:

1 - 120

Beam:

(156.14, 158.63) -> (156.14, 158.78)

Distance:

139.22 -> 138.98

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.01 2.74 1.01
Low resolution limit 25.47 25.47 1.03
Completeness 91.0 100.0 20.0
Multiplicity 7.5 8.1 1.3
I/sigma 21.4 38.2 1.0
Rmerge 0.054 0.054 0.643
CC half 0.994 0.989 0.411
Anomalous completeness 84.7 98.0 3.8
Anomalous multiplicity 4.1 4.1 4.1
Cell 78.88 78.88 36.8 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9795

Sweep:

SWEEP1

Files:

/programs/datagrid/656/teste_5_###.img

Images:

1 - 120

Beam:

(156.14, 158.63) -> (156.14, 158.78)

Distance:

139.22 -> 138.93

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.01 2.74 1.01
Low resolution limit 35.28 35.3 1.03
Completeness 91.0 100.0 20.0
Multiplicity 7.5 8.0 1.3
I/sigma 21.4 38.1 1.0
Rmerge 0.054 0.054 0.643
CC half 0.994 0.989 0.413
Anomalous completeness 84.7 98.0 3.8
Anomalous multiplicity 4.1 4.1 4.1
Cell 78.88 78.88 36.8 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.9795

Sweep:

SWEEP1

Files:

/programs/datagrid/656/teste_5_###.img

Images:

1 - 120

Beam:

(156.14, 158.63) -> (156.14, 158.76)

Distance:

139.22 -> 138.91

Spacegroup:

P 41 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.01 2.75 1.01
Low resolution limit 36.79 36.81 1.03
Completeness 89.9 91.7 15.0
Multiplicity 7.5 7.7 1.3
I/sigma 14.4 89.2 0.1
Rmerge 0.063 0.04 0.563
CC half 0.997 0.993 0.647
Anomalous completeness 83.7 87.8 2.6
Anomalous multiplicity 4.1 4.1 4.1
Cell 78.864 78.864 36.793 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.