Data DOI: 10.15785/SBGRID/643 | ID: 643
Publication DOI: 10.7554/eLife.41028
6NRW Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Ozkan Laboratory, University of Chicago
Release Date: 15 Feb 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/643
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/643 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/643 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/643 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/643 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 643 ; shasum -c files.sha'
Storage requirements: 7.0G
Biological Sample:
D. melanogaster Dpr1 IG1 bound to DIP-eta IG1
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline 23-ID-D, GM/CA, APS, Chicago, IL
Data Creation Date:
9 Mar 2015
Related Datasets:
None
Cheng, S; Park, YJ; Ozkan, E. 2019. "X-Ray Diffraction data for: D. melanogaster Dpr1 IG1 bound to DIP-eta IG1. PDB Code 6NRW", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/643.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Shouqiang Cheng | Data Collector | University of Chicago |
| Yeonhee J Park | Data Collector | University of Chicago |
| Engin Ozkan | Data Collector, Depositor, PI | University of Chicago |
Data collected on a Pilatus 6M detector using HKL2000 beam centers, x-beam=219.555, y-beam=208.639, distance=499 mm.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP2
Files:
/programs/datagrid/643/A1_3_#####.cbf
Images:
1 - 600
Beam:
(219.82, 208.98) -> (219.82, 208.46)
Distance:
500.0 -> 500.5
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.28 | 6.18 | 2.28 |
| Low resolution limit | 33.55 | 33.56 | 2.32 |
| Completeness | 91.1 | 100.0 | 51.5 |
| Multiplicity | 16.5 | 14.5 | 10.6 |
| I/sigma | 12.7 | 33.0 | 0.9 |
| Rmerge | 0.135 | 0.056 | 2.526 |
| CC half | 0.998 | 0.999 | 0.407 |
| Anomalous completeness | 91.0 | 99.7 | 49.9 |
| Anomalous multiplicity | 8.9 | 8.9 | 8.9 |
| Cell | 74.23 | 74.23 | 235.46 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP2
Files:
/programs/datagrid/643/A1_3_#####.cbf
Images:
1 - 600
Beam:
(219.82, 208.98) -> (219.82, 208.46)
Distance:
500.0 -> 498.97
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.29 | 6.21 | 2.29 |
| Low resolution limit | 39.76 | 39.77 | 2.33 |
| Completeness | 91.6 | 100.0 | 52.4 |
| Multiplicity | 16.5 | 14.5 | 12.5 |
| I/sigma | 12.8 | 33.1 | 1.0 |
| Rmerge | 0.134 | 0.056 | 2.364 |
| CC half | 0.998 | 0.999 | 0.509 |
| Anomalous completeness | 91.5 | 99.7 | 51.3 |
| Anomalous multiplicity | 9.0 | 9.0 | 9.0 |
| Cell | 74.23 | 74.23 | 235.45 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP2
Files:
/programs/datagrid/643/A1_3_#####.cbf
Images:
1 - 600
Beam:
(219.82, 208.98) -> (219.82, 208.46)
Distance:
500.0 -> 499.06
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.19 | 5.95 | 2.19 |
| Low resolution limit | 43.63 | 43.64 | 2.23 |
| Completeness | 86.5 | 100.0 | 42.8 |
| Multiplicity | 16.5 | 15.1 | 13.4 |
| I/sigma | 9.5 | 33.1 | 0.4 |
| Rmerge | 0.15 | 0.068 | 2.939 |
| CC half | 0.997 | 0.999 | 0.456 |
| Anomalous completeness | 85.6 | 100.0 | 39.5 |
| Anomalous multiplicity | 9.0 | 9.0 | 9.0 |
| Cell | 74.222 | 74.222 | 235.555 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
