X-Ray Diffraction data from Mycobacterial glucosylglycerate hydrolase, source of 6Q5T structure

Data DOI: 10.15785/SBGRID/641 | ID: 641

Publication DOI: 10.1107/S2052252519005372

6Q5T Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: May 3, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/641

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/641 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/641 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/641 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/641 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 641 ; shasum -c files.sha'

Storage requirements: 7.6G

Biological Sample:

Mycobacterial glucosylglycerate hydrolase

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ESRF, ID29

Data Creation Date:

Nov. 27, 2015

Related Datasets:

None


Cite this Dataset

Cereija, T; Pereira, PJB. 2019. "X-Ray Diffraction data for: Mycobacterial glucosylglycerate hydrolase. PDB Code 6Q5T", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/641.

Download Citation

Dataset Description

X-Ray Diffraction data from M. hassiacum GgH, source of 6Q5T structure

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro JB PereiraDepositorIBMC - Instituto de Biologia Molecular e Celular
Tatiana CereijaData CollectorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.96863

Sweep:

SWEEP1

Files:

/programs/datagrid/641/bh3536_w1_1_####.cbf

Images:

1 - 1300

Beam:

(216.0, 211.0) -> (216.0, 211.58)

Distance:

490.02 -> 488.7

Spacegroup:

P 62 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.34 6.35 2.34
Low resolution limit 124.29 124.46 2.38
Completeness 99.5 99.2 98.8
Multiplicity 6.7 6.3 5.9
I/sigma 9.0 21.4 2.3
Rmerge 0.122 0.049 0.694
CC half 0.994 0.991 0.301
Anomalous completeness 98.8 97.9 97.8
Anomalous multiplicity 3.5 3.5 3.5
Cell 166.859 166.859 243.649 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.96863

Sweep:

SWEEP1

Files:

/programs/datagrid/641/bh3536_w1_1_####.cbf

Images:

1 - 1300

Beam:

(216.0, 211.0) -> (216.0, 211.53)

Distance:

490.02 -> 488.42

Spacegroup:

P 62 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.48 6.73 2.48
Low resolution limit 56.06 56.07 2.52
Completeness 99.7 100.0 99.7
Multiplicity 7.1 6.5 7.4
I/sigma 10.6 28.3 1.1
Rmerge 0.094 0.039 1.549
CC half 0.998 0.998 0.534
Anomalous completeness 99.2 99.2 99.7
Anomalous multiplicity 3.8 3.8 3.8
Cell 166.99 166.99 243.26 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.96863

Sweep:

SWEEP1

Files:

/programs/datagrid/641/bh3536_w1_1_####.cbf

Images:

1 - 1300

Beam:

(216.0, 211.0) -> (216.0, 211.53)

Distance:

490.02 -> 488.53

Spacegroup:

P 62 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.47 6.7 2.47
Low resolution limit 58.17 58.19 2.51
Completeness 99.7 100.0 99.6
Multiplicity 7.1 6.5 7.4
I/sigma 10.5 28.2 1.1
Rmerge 0.095 0.04 1.661
CC half 0.998 0.998 0.511
Anomalous completeness 99.2 99.2 99.8
Anomalous multiplicity 3.8 3.8 3.8
Cell 166.99 166.99 243.26 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.96863

Sweep:

SWEEP1

Files:

/programs/datagrid/641/bh3536_w1_1_####.cbf

Images:

1 - 1300

Beam:

(216.0, 211.0) -> (216.0, 211.53)

Distance:

490.02 -> 488.89

Spacegroup:

P 62 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.37 6.43 2.37
Low resolution limit 83.52 83.57 2.41
Completeness 99.8 100.0 99.4
Multiplicity 7.0 6.5 7.3
I/sigma 9.0 22.7 1.1
Rmerge 0.107 0.044 1.62
CC half 0.996 0.993 0.597
Anomalous completeness 99.4 99.5 99.5
Anomalous multiplicity 3.7 3.7 3.7
Cell 167.035 167.035 243.383 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.