X-Ray Diffraction data from protein, source of 6NMW structure

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Data DOI: 10.15785/SBGRID/640 | ID: 640

6NMW Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Iverson Laboratory, Vanderbilt University

Release Date: Jan. 18, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/640

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/640 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/640 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/640 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/640 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 640 ; shasum -c files.sha'

Storage requirements: 7.0G

Biological Sample:

protein

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL BL9-2

Data Creation Date:

July 7, 2018

Related Datasets:

None


Cite this Dataset

Berndt, S; Gurevich, VV; Iverson, TM; Iverson, T. 2019. "X-Ray Diffraction data for: protein. PDB Code 6NMW", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/640.

Download Citation

Dataset Description

Complete data set from a single crystal for Lyn kinase SH3 domain

Project Members

Name Additional Roles Affiliation While Working on the Project
Sandra BerndtData Collector, DepositorVanderbilt University
Vsevolod V GurevichVanderbilt University
T M IversonVanderbilt University
Tina IversonPIVanderbilt University

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/1.11.4/dials-1.11.4/build/bin/xia2 pipeline=2d /programs/datagrid//640/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/1.11.4/dials-1.11.4/build/bin/xia2 pipeline=3d /programs/datagrid//640/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/1.11.4/dials-1.11.4/build/bin/xia2 pipeline=3dii /programs/datagrid//640/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/1.11.4/dials-1.11.4/build/bin/xia2 pipeline=dials /programs/datagrid//640/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.