X-Ray Diffraction data from Designed repeat binding protein with Frizzled-4 CRD, source of 6NE1 structure

Data DOI: 10.15785/SBGRID/639 | ID: 639

Publication DOI: 0.1038/s41594-019-0224-z

6NE1 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Garcia Laboratory, Stanford University

Release Date: May 24, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/639

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/639 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/639 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/639 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/639 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 639 ; shasum -c files.sha'

Storage requirements: 2.1G

Biological Sample:

Designed repeat binding protein with Frizzled-4 CRD

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS beamline 8.2.2

Data Creation Date:

April 26, 2017

Related Datasets:

None


Cite this Dataset

Jude, KM; Garcia, KC; Miao, Y; Garcia, K. 2019. "X-Ray Diffraction data for: Designed repeat binding protein with Frizzled-4 CRD. PDB Code 6NE1", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/639.

Download Citation

Dataset Description

Native Dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin M JudeDepositorStanford University, Howard Hughes Medical Institute
K C GarciaStanford University, Howard Hughes Medical Institute
Yi MiaoData CollectorStanford University
K. Christopher GarciaPIStanford University

Reprocessing Instructions

Data were processed with HKL2000

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.00001

Sweep:

SWEEP1

Files:

/programs/datagrid/639/B8_1_#####.cbf

Images:

1 - 360

Beam:

(220.16, 214.31) -> (220.16, 214.43)

Distance:

550.0 -> 547.71

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.5 6.76 2.5
Low resolution limit 29.26 29.26 2.54
Completeness 99.6 100.0 95.4
Multiplicity 5.9 5.3 3.6
I/sigma 8.7 25.9 0.8
Rmerge 0.127 0.041 1.256
CC half 0.997 0.999 0.462
Anomalous completeness 96.8 98.6 83.0
Anomalous multiplicity 3.2 3.2 3.2
Cell 62.46 86.12 51.8 90.0 90.0 90.0

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.