X-Ray Diffraction data from EpoR complex with G2 DARPin, source of 6MOF structure

Data DOI: 10.15785/SBGRID/625 | ID: 625

6MOF Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Garcia Laboratory, Stanford University

Release Date: May 24, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/625

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/625 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/625 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/625 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/625 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 625 ; shasum -c files.sha'

Storage requirements: 5.3G

Biological Sample:

EpoR complex with G2 DARPin

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL beamline 12-2

Data Creation Date:

July 23, 2017

Related Datasets:

None


Cite this Dataset

Jude, KM; Garcia, KC; Mohan, K; Garcia, K. 2019. "X-Ray Diffraction data for: EpoR complex with G2 DARPin. PDB Code 6MOF", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/625.

Download Citation

Dataset Description

Native dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin M JudeData Collector, DepositorStanford University/Howard Hughes Medical Institute
K C GarciaStanford University, Howard Hughes Medical Institute
Kritika MohanStanford University
K. Christopher GarciaPIStanford University

Reprocessing Instructions

Frames 1-850 were processed with XDS

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/625/B13_4_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.84)

Distance:

550.0 -> 549.0

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.79 7.55 2.79
Low resolution limit 33.94 33.95 2.84
Completeness 98.9 98.9 98.3
Multiplicity 12.9 11.1 13.6
I/sigma 15.3 47.9 0.8
Rmerge 0.097 0.035 3.28
CC half 0.999 0.999 0.315
Anomalous completeness 99.3 99.3 99.1
Anomalous multiplicity 7.0 7.0 7.0
Cell 108.82 108.82 96.25 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/625/B13_4_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.83)

Distance:

550.0 -> 550.12

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.78 7.53 2.78
Low resolution limit 38.47 38.48 2.83
Completeness 98.9 98.8 98.8
Multiplicity 12.9 11.0 13.6
I/sigma 15.1 47.6 0.8
Rmerge 0.098 0.036 3.23
CC half 0.999 0.999 0.278
Anomalous completeness 99.3 99.1 99.1
Anomalous multiplicity 7.0 7.0 7.0
Cell 108.82 108.82 96.25 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97946

Sweep:

SWEEP1

Files:

/programs/datagrid/625/B13_4_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.83)

Distance:

550.0 -> 550.13

Spacegroup:

P 4 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.64 7.15 2.64
Low resolution limit 38.48 38.48 2.69
Completeness 98.8 97.9 96.9
Multiplicity 13.0 11.5 13.8
I/sigma 12.2 62.1 0.3
Rmerge 0.109 0.039 3.164
CC half 0.999 0.999 0.312
Anomalous completeness 99.2 98.1 97.9
Anomalous multiplicity 7.0 7.0 7.0
Cell 108.834 108.834 96.2 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.