X-Ray Diffraction data from EpoR complex with dimeric DARPin ANR7, source of 6MOK structure

Data DOI: 10.15785/SBGRID/623 | ID: 623

Publication DOI: 10.1126/science.aav7532

6MOK Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Garcia Laboratory, Stanford University

Release Date: 24 May 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/623

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/623 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/623 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/623 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/623 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 623 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

EpoR complex with dimeric DARPin ANR7

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS beamline 8.2.1

Data Creation Date:

19 Apr 2018

Related Datasets:

None


Cite this Dataset

Jude, KM; Garcia, KC; Guo, Y; Mohan, K; Garcia, K. 2019. "X-Ray Diffraction data for: EpoR complex with dimeric DARPin ANR7. PDB Code 6MOK", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/623.

Download Citation

Dataset Description

Native Dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin M JudeData Collector, DepositorStanford University/Howard Hughes Medical Institute
K C GarciaStanford University, Howard Hughes Medical Institute
Yu GuoNankai University
Kritika MohanStanford University
K. Christopher GarciaPIStanford University

Reprocessing Instructions

frames 1-90 were processed with XDS

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.00001

Sweep:

SWEEP1

Files:

/programs/datagrid/623/ANR7_A2_1_#####.img

Images:

1 - 180

Beam:

(147.8, 156.0) -> (147.8, 155.59)

Distance:

500.01 -> 495.72

Spacegroup:

P 6 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.27 6.16 2.27
Low resolution limit 56.43 56.45 2.31
Completeness 69.7 100.0 3.3
Multiplicity 13.6 18.5 1.0
I/sigma 1.1 9.4 0.3
Rmerge 0.485 0.159 0.0
CC half 0.989 0.991 0.0
Anomalous completeness 62.0 100.0 0.0
Anomalous multiplicity 7.7 7.7 7.7
Cell 112.86 112.86 225.22 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.00001

Sweep:

SWEEP1

Files:

/programs/datagrid/623/ANR7_A2_1_#####.img

Images:

1 - 180

Beam:

(147.8, 156.0) -> (147.8, 155.57)

Distance:

500.01 -> 500.69

Spacegroup:

P 62 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.29 6.21 2.29
Low resolution limit 90.3 90.37 2.33
Completeness 68.7 100.0 4.5
Multiplicity 13.7 18.5 1.0
I/sigma 1.1 9.1 0.2
Rmerge 0.425 0.163 0.0
CC half 0.993 0.992 0.0
Anomalous completeness 60.8 100.0 0.0
Anomalous multiplicity 7.8 7.8 7.8
Cell 113.67 113.67 226.78 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.00001

Sweep:

SWEEP1

Files:

/programs/datagrid/623/ANR7_A2_1_#####.img

Images:

1 - 180

Beam:

(147.8, 156.0) -> (147.8, 155.58)

Distance:

500.01 -> 494.92

Spacegroup:

C 1 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 6.91 18.68 6.91
Low resolution limit 77.18 77.18 7.03
Completeness 99.9 99.6 97.8
Multiplicity 3.8 3.7 3.8
I/sigma 13.7 45.1 1.4
Rmerge 0.122 0.124 1.19
CC half 0.852 0.82 0.404
Anomalous completeness 99.4 99.3 97.5
Anomalous multiplicity 1.9 1.9 1.9
Cell 116.1 200.554 231.53 90.0 89.799 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.