Data DOI: 10.15785/SBGRID/62 | ID: 62
Publication DOI: 10.1073/pnas.1300524110
4ILD Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Modis Laboratory, University of Cambridge
Release Date: 7 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/62
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/62 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/62 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/62 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/62 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 62 ; shasum -c files.sha'
Storage requirements: 7.0G
Biological Sample:
Glycoprotein E2 from bovine viral diarrhea virus
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline X25, NSLS, BNL
Data Creation Date:
4 Dec 2012
Related Datasets:
None
Li, Y; Wang, J; Modis, Y. 2015. "X-Ray Diffraction data for: Glycoprotein E2 from bovine viral diarrhea virus. PDB Code 4ILD", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/62.
Uranyl acetate derivative 2, E2 domains I-II
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Yue Li | Data Collector | Yale University |
| Jimin Wang | Data Collector | Yale University |
| Yorgo Modis | Data Collector, Depositor, PI | University of Cambridge |
Use HKL2000 or XDS
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.2142
Sweep:
SWEEP1
Files:
/programs/datagrid/62/uoac_5mM_2_1_#####.cbf
Images:
1 - 1200
Beam:
(226.87, 220.33) -> (226.87, 218.33)
Distance:
500.0 -> 505.6
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.9 | 7.86 | 2.9 |
| Low resolution limit | 50.63 | 50.63 | 2.95 |
| Completeness | 99.6 | 98.2 | 99.0 |
| Multiplicity | 6.4 | 6.0 | 5.3 |
| I/sigma | 11.7 | 36.6 | 0.5 |
| Rmerge | 0.089 | 0.032 | 3.911 |
| CC half | 0.998 | 0.997 | 0.405 |
| Anomalous completeness | 98.3 | 95.9 | 97.0 |
| Anomalous multiplicity | 3.3 | 3.3 | 3.3 |
| Cell | 136.8 | 54.5 | 95.98 | 90.0 | 92.17 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.2142
Sweep:
SWEEP1
Files:
/programs/datagrid/62/uoac_5mM_2_1_#####.cbf
Images:
1 - 1200
Beam:
(226.87, 220.33) -> (226.87, 218.32)
Distance:
500.0 -> 505.27
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.07 | 8.33 | 3.07 |
| Low resolution limit | 119.94 | 120.03 | 3.12 |
| Completeness | 98.9 | 96.7 | 99.3 |
| Multiplicity | 6.5 | 5.8 | 6.3 |
| I/sigma | 4.4 | 12.6 | 0.3 |
| Rmerge | 0.191 | 0.037 | 7.112 |
| CC half | 0.998 | 0.999 | 0.413 |
| Anomalous completeness | 96.9 | 90.4 | 98.9 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 239.93 | 54.51 | 164.12 | 90.0 | 91.15 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.2142
Sweep:
SWEEP1
Files:
/programs/datagrid/62/uoac_5mM_2_1_#####.cbf
Images:
1 - 1200
Beam:
(226.87, 220.33) -> (226.87, 218.3)
Distance:
500.0 -> 503.73
Spacegroup:
C 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.82 | 7.65 | 2.82 |
| Low resolution limit | 96.06 | 96.11 | 2.87 |
| Completeness | 99.4 | 100.0 | 90.9 |
| Multiplicity | 6.3 | 6.3 | 4.4 |
| I/sigma | 5.4 | 32.2 | 0.1 |
| Rmerge | 0.116 | 0.052 | 4.053 |
| CC half | 0.996 | 0.998 | 0.289 |
| Anomalous completeness | 98.7 | 99.9 | 87.5 |
| Anomalous multiplicity | 3.3 | 3.3 | 3.3 |
| Cell | 137.029 | 54.574 | 96.123 | 90.0 | 92.102 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
