Data DOI: 10.15785/SBGRID/614 | ID: 614
Publication DOI: 10.1128/mBio.00239-19
6HWJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 14 May 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/614
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/614 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/614 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/614 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/614 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 614 ; shasum -c files.sha'
Storage requirements: 3.5G
Biological Sample:
Glucosamine kinase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ALBA BL13-XALOC
Data Creation Date:
16 Oct 2016
Related Datasets:
None
Manso, JA; Pereira, PJB. 2019. "X-Ray Diffraction data for: Glucosamine kinase. PDB Code 6HWJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/614.
X-Ray Diffraction data from S. jiangxiensis GlcNK, source of 6HWJ structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Jose A Manso | Data Collector | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP1
Files:
/programs/datagrid/614/bg3006_2_####.cbf
Images:
1 - 600
Beam:
(224.66, 211.77) -> (224.66, 211.81)
Distance:
295.57 -> 293.87
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.87 | 5.07 | 1.87 |
| Low resolution limit | 26.98 | 26.98 | 1.9 |
| Completeness | 98.1 | 99.3 | 97.7 |
| Multiplicity | 3.5 | 3.4 | 3.5 |
| I/sigma | 11.2 | 37.5 | 0.8 |
| Rmerge | 0.052 | 0.018 | 1.299 |
| CC half | 0.999 | 0.999 | 0.313 |
| Anomalous completeness | 90.4 | 93.2 | 88.7 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 59.81 | 96.07 | 80.25 | 90.0 | 106.69 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP1
Files:
/programs/datagrid/614/bg3006_2_####.cbf
Images:
1 - 600
Beam:
(224.66, 211.77) -> (224.66, 211.82)
Distance:
295.57 -> 294.51
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.88 | 5.1 | 1.88 |
| Low resolution limit | 96.07 | 96.2 | 1.91 |
| Completeness | 98.1 | 99.3 | 97.2 |
| Multiplicity | 3.5 | 3.4 | 3.5 |
| I/sigma | 11.4 | 37.3 | 0.9 |
| Rmerge | 0.052 | 0.018 | 1.215 |
| CC half | 0.999 | 0.999 | 0.322 |
| Anomalous completeness | 90.4 | 93.1 | 88.5 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 59.81 | 96.07 | 80.25 | 90.0 | 106.69 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.0332
Sweep:
SWEEP1
Files:
/programs/datagrid/614/bg3006_2_####.cbf
Images:
1 - 600
Beam:
(224.66, 211.77) -> (224.66, 211.82)
Distance:
295.57 -> 294.65
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.79 | 4.86 | 1.79 |
| Low resolution limit | 96.05 | 96.19 | 1.82 |
| Completeness | 98.0 | 99.6 | 96.2 |
| Multiplicity | 3.4 | 3.4 | 3.4 |
| I/sigma | 16.5 | 82.0 | 0.6 |
| Rmerge | 0.055 | 0.019 | 1.289 |
| CC half | 0.998 | 0.997 | 0.341 |
| Anomalous completeness | 91.2 | 95.5 | 87.9 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 59.829 | 96.05 | 80.26 | 90.0 | 106.688 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
