Data DOI: 10.15785/SBGRID/61 | ID: 61
Publication DOI: 10.1073/pnas.1300524110
4JNT Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Modis Laboratory, University of Cambridge
Release Date: 7 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/61
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/61 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/61 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/61 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/61 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 61 ; shasum -c files.sha'
Storage requirements: 3.6G
Biological Sample:
Glycoprotein E2 from bovine viral diarrhea virus
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline X25, NSLS, BNL
Data Creation Date:
4 Dec 2012
Related Datasets:
None
Li, Y; Wang, J; Modis, Y. 2015. "X-Ray Diffraction data for: Glycoprotein E2 from bovine viral diarrhea virus. PDB Code 4JNT", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/61.
Native, full-length ectodomain (domains I-III)
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Yue Li | Data Collector | Yale University |
| Jimin Wang | Data Collector | Yale University |
| Yorgo Modis | Depositor, PI | University of Cambridge |
Use XDS for best results due to anisotropy of diffraction.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/61/122_04_1_###.img
Images:
1 - 200
Beam:
(157.18, 156.39) -> (157.18, 156.3)
Distance:
400.0 -> 398.66
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 4.04 | 10.97 | 4.04 |
| Low resolution limit | 117.32 | 117.37 | 4.11 |
| Completeness | 99.1 | 99.8 | 98.7 |
| Multiplicity | 2.2 | 2.2 | 2.2 |
| I/sigma | 5.4 | 29.4 | 0.6 |
| Rmerge | 0.145 | 0.138 | 0.83 |
| CC half | 0.663 | 0.664 | 0.415 |
| Anomalous completeness | 93.9 | 99.1 | 92.9 |
| Anomalous multiplicity | 1.1 | 1.1 | 1.1 |
| Cell | 67.445 | 83.948 | 122.035 | 82.075 | 74.127 | 66.325 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
