X-Ray Diffraction data from Methyltransferase, source of 6G7D structure

Data DOI: 10.15785/SBGRID/594 | ID: 594

Publication DOI: 10.1073/pnas.1813450116

6G7D Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: Jan. 11, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/594

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/594 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/594 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/594 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/594 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 594 ; shasum -c files.sha'

Storage requirements: 14G

Biological Sample:

Methyltransferase

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

SOLEIL PX2A

Data Creation Date:

Dec. 10, 2016

Related Datasets:

None


Cite this Dataset

Ripoll-Rozada, J; Pereira, PJB. 2019. "X-Ray Diffraction data for: Methyltransferase. PDB Code 6G7D", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/594.

Download Citation

Dataset Description

X-Ray Diffraction data from M. hassiacum MeT1, source of 6G7D structure

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro JB PereiraDepositorIBMC - Instituto de Biologia Molecular e Celular
Jorge Ripoll-RozadaData CollectorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.98011

Sweep:

SWEEP1

Files:

/programs/datagrid/594/AC7497_1_master.h5

Images:

1 - 3600

Beam:

(125.98, 117.62) -> (125.98, 117.68)

Distance:

126.96 -> 127.52

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.4 3.8 1.4
Low resolution limit 49.25 49.28 1.42
Completeness 100.0 100.0 100.0
Multiplicity 18.3 21.0 17.4
I/sigma 11.3 40.4 1.0
Rmerge 0.138 0.065 3.215
CC half 0.999 0.999 0.352
Anomalous completeness 100.0 100.0 100.0
Anomalous multiplicity 9.4 9.4 9.4
Cell 113.73 113.73 41.22 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.98011

Sweep:

SWEEP1

Files:

/programs/datagrid/594/AC7497_1_master.h5

Images:

1 - 3600

Beam:

(125.98, 117.62) -> (125.98, 117.69)

Distance:

126.96 -> 127.3

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.38 3.74 1.38
Low resolution limit 56.84 56.89 1.4
Completeness 100.0 100.0 99.0
Multiplicity 20.2 21.5 20.6
I/sigma 9.3 28.1 1.2
Rmerge 0.297 0.078 7.255
CC half 0.998 0.998 0.632
Anomalous completeness 99.9 99.9 99.0
Anomalous multiplicity 10.4 10.4 10.4
Cell 113.679 113.679 41.202 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.