X-Ray Diffraction data from Methyltransferase, source of 6H40 structure

Data DOI: 10.15785/SBGRID/593 | ID: 593

Publication DOI: 10.1073/pnas.1813450116

6H40 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: Jan. 11, 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/593

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/593 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/593 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/593 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/593 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 593 ; shasum -c files.sha'

Storage requirements: 5.3G

Biological Sample:

Methyltransferase

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

ALBA BL13-XALOC

Data Creation Date:

June 15, 2018

Related Datasets:

None


Cite this Dataset

Ripoll-Rozada, J; Pereira, PJB. 2019. "X-Ray Diffraction data for: Methyltransferase. PDB Code 6H40", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/593.

Download Citation

Dataset Description

X-Ray Diffraction data from M. hassiacum MeT1, source of 6H40 structure

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro JB PereiraDepositorIBMC - Instituto de Biologia Molecular e Celular
Jorge Ripoll-RozadaData CollectorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97929

Sweep:

SWEEP1

Files:

/programs/datagrid/593/B1X5_4_####.cbf

Images:

1 - 900

Beam:

(217.76, 212.5) -> (217.76, 212.5)

Distance:

160.04 -> 159.1

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.02 2.77 1.02
Low resolution limit 37.94 37.96 1.04
Completeness 97.7 98.4 80.0
Multiplicity 4.1 4.8 1.9
I/sigma 11.1 34.4 1.0
Rmerge 0.048 0.033 0.747
CC half 0.998 0.997 0.223
Anomalous completeness 88.5 95.7 37.7
Anomalous multiplicity 2.2 2.2 2.2
Cell 113.168 113.168 41.144 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97929

Sweep:

SWEEP1

Files:

/programs/datagrid/593/B1X5_4_####.cbf

Images:

1 - 900

Beam:

(217.76, 212.5) -> (217.76, 212.45)

Distance:

160.04 -> 158.8

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.03 2.8 1.03
Low resolution limit 48.98 49.04 1.05
Completeness 98.8 98.8 89.1
Multiplicity 4.5 4.8 2.5
I/sigma 15.5 47.2 1.0
Rmerge 0.032 0.022 0.752
CC half 0.999 0.999 0.434
Anomalous completeness 93.0 92.6 58.7
Anomalous multiplicity 2.4 2.4 2.4
Cell 113.12 113.12 41.1 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97929

Sweep:

SWEEP1

Files:

/programs/datagrid/593/B1X5_4_####.cbf

Images:

1 - 900

Beam:

(217.76, 212.5) -> (217.76, 212.45)

Distance:

160.04 -> 158.73

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.02 2.77 1.02
Low resolution limit 48.99 49.04 1.04
Completeness 98.4 98.8 85.9
Multiplicity 4.5 4.8 2.3
I/sigma 14.9 46.0 0.9
Rmerge 0.033 0.022 0.831
CC half 0.998 0.998 0.357
Anomalous completeness 91.8 92.6 50.7
Anomalous multiplicity 2.4 2.4 2.4
Cell 113.13 113.13 41.1 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97929

Sweep:

SWEEP1

Files:

/programs/datagrid/593/B1X5_4_####.cbf

Images:

1 - 900

Beam:

(217.76, 212.5) -> (217.76, 212.44)

Distance:

160.04 -> 158.99

Spacegroup:

P 31 2 1

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.01 2.74 1.01
Low resolution limit 49.02 49.07 1.03
Completeness 97.6 99.2 76.0
Multiplicity 4.3 5.0 1.9
I/sigma 12.8 39.7 0.9
Rmerge 0.037 0.028 0.703
CC half 0.998 0.997 0.483
Anomalous completeness 89.6 97.3 34.7
Anomalous multiplicity 2.3 2.3 2.3
Cell 113.197 113.197 41.128 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.