Data DOI: 10.15785/SBGRID/592 | ID: 592
6E3L Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 31 Aug 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/592
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/592 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/592 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/592 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/592 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 592 ; shasum -c files.sha'
Storage requirements: 6.4G
Biological Sample:
Interferon gamma signalling complex, glycosylated
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 8.2.2, ALS
Data Creation Date:
26 Sep 2017
Related Datasets:
None
Jude, KM; Garcia, KC; Mendoza, JL; Garcia, K. 2021. "X-Ray Diffraction data for: Interferon gamma signalling complex, glycosylated. PDB Code 6E3L", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/592.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Depositor | Stanford University, Howard Hughes Medical Institute |
| K C Garcia | Stanford University, Howard Hughes Medical Institute | |
| Juan L Mendoza | Data Collector | Stanford University |
| K. Christopher Garcia | PI | Stanford University |
processed with XDS
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99999
Sweep:
SWEEP1
Files:
/programs/datagrid/592/C11_1_#####.img
Images:
1 - 360
Beam:
(154.5, 163.2) -> (154.5, 162.78)
Distance:
475.0 -> 467.99
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.58 | 9.71 | 3.58 |
| Low resolution limit | 70.26 | 70.28 | 3.64 |
| Completeness | 100.0 | 98.6 | 99.9 |
| Multiplicity | 14.4 | 12.1 | 14.7 |
| I/sigma | 7.9 | 40.0 | 0.7 |
| Rmerge | 0.306 | 0.042 | 4.656 |
| CC half | 0.998 | 0.999 | 0.4 |
| Anomalous completeness | 99.9 | 98.7 | 99.9 |
| Anomalous multiplicity | 7.6 | 7.6 | 7.6 |
| Cell | 78.03 | 149.04 | 210.91 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99999
Sweep:
SWEEP1
Files:
/programs/datagrid/592/C11_1_#####.img
Images:
1 - 360
Beam:
(154.5, 163.2) -> (154.5, 162.79)
Distance:
475.0 -> 469.61
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.61 | 9.79 | 3.61 |
| Low resolution limit | 60.86 | 60.87 | 3.67 |
| Completeness | 100.0 | 99.0 | 99.9 |
| Multiplicity | 14.3 | 12.1 | 14.7 |
| I/sigma | 8.1 | 40.1 | 0.8 |
| Rmerge | 0.297 | 0.042 | 4.425 |
| CC half | 0.998 | 0.999 | 0.442 |
| Anomalous completeness | 99.9 | 98.7 | 99.7 |
| Anomalous multiplicity | 7.6 | 7.6 | 7.6 |
| Cell | 78.03 | 149.04 | 210.91 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.99999
Sweep:
SWEEP1
Files:
/programs/datagrid/592/C11_1_#####.img
Images:
1 - 360
Beam:
(154.5, 163.2) -> (154.5, 162.8)
Distance:
475.0 -> 464.41
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.73 | 7.42 | 2.73 |
| Low resolution limit | 85.55 | 85.59 | 2.78 |
| Completeness | 99.3 | 100.0 | 91.4 |
| Multiplicity | 11.6 | 12.7 | 6.4 |
| I/sigma | 13.1 | 24.9 | 14.7 |
| Rmerge | 0.503 | 0.286 | 0.224 |
| CC half | 0.815 | 0.953 | 0.203 |
| Anomalous completeness | 99.6 | 100.0 | 93.9 |
| Anomalous multiplicity | 6.1 | 6.1 | 6.1 |
| Cell | 77.525 | 148.106 | 209.605 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
