Data DOI: 10.15785/SBGRID/591 | ID: 591
6E3K Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 31 Aug 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/591
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/591 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/591 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/591 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/591 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 591 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
Interferon gamma signalling complex, glycan-shaved
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 12-2, SSRL
Data Creation Date:
23 Jul 2017
Related Datasets:
None
Jude, KM; Garcia, KC; Mendoza, JL; Garcia, K. 2021. "X-Ray Diffraction data for: Interferon gamma signalling complex, glycan-shaved. PDB Code 6E3K", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/591.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Depositor | Stanford University/Howard Hughes Medical Institute |
| K C Garcia | Stanford University/Howard Hughes Medical Institute | |
| Juan L Mendoza | Data Collector | Stanford University |
| K. Christopher Garcia | PI | Stanford University |
data were reduced in xds
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/591/D5B_8_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.76)
Distance:
650.11 -> 651.35
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.1 | 8.39 | 3.1 |
| Low resolution limit | 37.85 | 37.85 | 3.15 |
| Completeness | 99.9 | 99.3 | 100.0 |
| Multiplicity | 6.6 | 5.9 | 6.9 |
| I/sigma | 11.6 | 35.0 | 0.6 |
| Rmerge | 0.1 | 0.036 | 3.649 |
| CC half | 0.998 | 0.998 | 0.301 |
| Anomalous completeness | 99.3 | 97.7 | 99.6 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 78.18 | 151.27 | 211.03 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/591/D5B_8_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.74)
Distance:
650.11 -> 648.98
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.1 | 8.4 | 3.1 |
| Low resolution limit | 43.73 | 43.74 | 3.15 |
| Completeness | 99.9 | 99.2 | 100.0 |
| Multiplicity | 6.6 | 5.9 | 6.9 |
| I/sigma | 11.6 | 34.9 | 0.6 |
| Rmerge | 0.1 | 0.036 | 3.636 |
| CC half | 0.998 | 0.998 | 0.29 |
| Anomalous completeness | 99.3 | 97.8 | 99.6 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 78.18 | 151.26 | 211.03 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/591/D5B_8_#####.cbf
Images:
1 - 900
Beam:
(217.32, 211.82) -> (217.32, 211.76)
Distance:
650.11 -> 650.38
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.97 | 8.05 | 2.97 |
| Low resolution limit | 43.85 | 43.85 | 3.02 |
| Completeness | 99.6 | 99.8 | 94.0 |
| Multiplicity | 6.5 | 6.0 | 5.5 |
| I/sigma | 5.8 | 38.4 | 0.1 |
| Rmerge | 0.13 | 0.045 | 4.234 |
| CC half | 0.995 | 0.994 | 0.224 |
| Anomalous completeness | 99.4 | 98.9 | 93.6 |
| Anomalous multiplicity | 3.4 | 3.4 | 3.4 |
| Cell | 78.378 | 151.717 | 211.585 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
