Data DOI: 10.15785/SBGRID/588 | ID: 588
Publication DOI: 10.1038/s41586-018-0830-7
6DG5 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: Jan. 11, 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/588
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/588 .'
(Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/588 .'
(Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/588 .'
(Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/588 .'
(Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 588 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
neoleukin-2/15 complex with IL-2R beta and gamma receptors
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ALS 5.0.1
Data Creation Date:
Jan. 28, 2018
Related Datasets:
None
Jude, KM; Garcia, KC; Garcia, K. 2019. "X-Ray Diffraction data for: neoleukin-2/15 complex with IL-2R beta and gamma receptors. PDB Code 6DG5", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/588.
native dataset, highly anisotropic
Name | Additional Roles | Affiliation While Working on the Project |
---|---|---|
Kevin M Jude | Data Collector, Depositor | Stanford University/Howard Hughes Medical Institute |
K C Garcia | Stanford University/Howard Hughes Medical Institute | |
K. Christopher Garcia | PI | Stanford University |
First 1280 images were processed with XDS and scaled in aimless. Unmerged, scaled reflections were submitted to the STARANISO server for elliptical truncation
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97741
Sweep:
SWEEP1
Files:
/programs/datagrid/588/1448-13_10_#####.cbf
Images:
1 - 1800
Beam:
(223.94, 237.53) -> (223.94, 236.95)
Distance:
500.0 -> 498.96
Spacegroup:
P 21 2 21
For AUTOMATIC/DEFAULT/SAD:
ALL | LOW | HIGH | |
---|---|---|---|
High resolution limit | 2.78 | 7.54 | 2.78 |
Low resolution limit | 85.75 | 85.79 | 2.83 |
Completeness | 99.9 | 100.0 | 94.2 |
Multiplicity | 12.8 | 11.7 | 13.2 |
I/sigma | 3.0 | 15.7 | 0.2 |
Rmerge | 0.714 | 0.117 | 10.755 |
CC half | 0.988 | 0.995 | 0.326 |
Anomalous completeness | 99.7 | 100.0 | 94.0 |
Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
Cell | 65.126 | 67.693 | 171.498 | 90.0 | 90.0 | 90.0 |
---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.