Data DOI: 10.15785/SBGRID/587 | ID: 587
Publication DOI: 10.1038/s41586-018-0830-7
6DG6 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 11 Jan 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/587
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/587 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/587 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/587 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/587 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 587 ; shasum -c files.sha'
Storage requirements: 11G
Biological Sample:
neoleukin-2/15
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 12-2, SSRL
Data Creation Date:
23 Jul 2017
Related Datasets:
None
Jude, KM; Garcia, KC; Garcia, K. 2019. "X-Ray Diffraction data for: neoleukin-2/15. PDB Code 6DG6", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/587.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | Stanford University/Howard Hughes Medical Institute |
| K C Garcia | Stanford University/Howard Hughes Medical Institute | |
| K. Christopher Garcia | PI | Stanford University |
first 1195 images processed with XDS
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/587/S11_A7_6_#####.cbf
Images:
1 - 1800
Beam:
(217.32, 211.82) -> (217.32, 211.94)
Distance:
350.0 -> 349.55
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.94 | 5.26 | 1.94 |
| Low resolution limit | 29.02 | 29.02 | 1.97 |
| Completeness | 100.0 | 100.0 | 99.9 |
| Multiplicity | 13.2 | 11.9 | 13.5 |
| I/sigma | 11.9 | 37.5 | 0.6 |
| Rmerge | 0.121 | 0.046 | 3.929 |
| CC half | 0.999 | 0.999 | 0.246 |
| Anomalous completeness | 99.9 | 99.7 | 99.9 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 73.74 | 86.89 | 92.37 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/587/S11_A7_6_#####.cbf
Images:
1 - 1800
Beam:
(217.32, 211.82) -> (217.32, 211.94)
Distance:
350.0 -> 349.64
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.94 | 5.26 | 1.94 |
| Low resolution limit | 40.78 | 40.79 | 1.97 |
| Completeness | 100.0 | 100.0 | 99.9 |
| Multiplicity | 13.2 | 11.9 | 13.5 |
| I/sigma | 11.9 | 37.4 | 0.6 |
| Rmerge | 0.121 | 0.046 | 3.935 |
| CC half | 0.999 | 0.999 | 0.243 |
| Anomalous completeness | 99.9 | 99.7 | 99.8 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 73.74 | 86.89 | 92.37 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/587/S11_A7_6_#####.cbf
Images:
1 - 1800
Beam:
(217.32, 211.82) -> (217.32, 211.94)
Distance:
350.0 -> 349.54
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.85 | 5.02 | 1.85 |
| Low resolution limit | 40.77 | 40.78 | 1.88 |
| Completeness | 99.9 | 100.0 | 98.8 |
| Multiplicity | 13.2 | 12.8 | 13.7 |
| I/sigma | 7.6 | 38.0 | 0.2 |
| Rmerge | 0.133 | 0.057 | 5.009 |
| CC half | 0.999 | 0.999 | 0.341 |
| Anomalous completeness | 99.9 | 99.9 | 98.9 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 73.7 | 86.894 | 92.327 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
