X-Ray Diffraction data from Eremothecium gossypii Shu1:Shu2 complex, source of 6DEX structure

Data DOI: 10.15785/SBGRID/586 | ID: 586

6DEX Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 15 May 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/586

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/586 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/586 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/586 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/586 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 586 ; shasum -c files.sha'

Storage requirements: 3.0G

Biological Sample:

Eremothecium gossypii Shu1:Shu2 complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS 24ID-C

Data Creation Date:

24 Oct 2017

Related Datasets:

None


Cite this Dataset

Singh, N; Corbett, KD. 2018. "X-Ray Diffraction data for: Eremothecium gossypii Shu1:Shu2 complex. PDB Code 6DEX", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/586.

Download Citation

Dataset Description

Zinc-anomalous SAD dataset for Eremothecium gossypii Shu1:Shu2 complex

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorUC San Diego
Namit SinghData CollectorUC San Diego
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

Process in P212121

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.2826

Sweep:

SWEEP1

Files:

/programs/datagrid/586/8_7_1_####.cbf

Images:

1 - 500

Beam:

(217.02, 223.05) -> (217.02, 223.18)

Distance:

200.0 -> 199.86

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.78 7.54 2.78
Low resolution limit 66.01 66.03 2.83
Completeness 96.4 95.3 99.1
Multiplicity 3.3 3.5 3.4
I/sigma 14.2 21.5 7.5
Rmerge 0.068 0.045 0.255
CC half 0.973 0.972 0.503
Anomalous completeness 86.8 92.7 88.5
Anomalous multiplicity 1.9 1.9 1.9
Cell 83.79 107.165 37.284 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.2826

Sweep:

SWEEP1

Files:

/programs/datagrid/586/8_7_1_####.cbf

Images:

1 - 500

Beam:

(217.02, 223.05) -> (217.02, 223.02)

Distance:

200.0 -> 199.12

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.96 5.31 1.96
Low resolution limit 27.96 27.97 1.99
Completeness 96.0 91.0 97.8
Multiplicity 3.4 3.3 3.5
I/sigma 12.3 31.7 1.5
Rmerge 0.045 0.028 0.602
CC half 0.994 0.999 0.794
Anomalous completeness 81.1 79.1 84.5
Anomalous multiplicity 2.0 2.0 2.0
Cell 83.89 107.05 37.24 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.2826

Sweep:

SWEEP1

Files:

/programs/datagrid/586/8_7_1_####.cbf

Images:

1 - 500

Beam:

(217.02, 223.05) -> (217.02, 223.03)

Distance:

200.0 -> 199.49

Spacegroup:

P 21 21 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.97 5.35 1.97
Low resolution limit 66.03 66.06 2.0
Completeness 96.0 91.4 97.2
Multiplicity 3.4 3.3 3.5
I/sigma 12.4 31.4 1.6
Rmerge 0.045 0.028 0.572
CC half 0.994 0.999 0.796
Anomalous completeness 81.3 79.5 85.0
Anomalous multiplicity 2.0 2.0 2.0
Cell 83.88 107.05 37.24 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 1.2826

Sweep:

SWEEP1

Files:

/programs/datagrid/586/8_7_1_####.cbf

Images:

1 - 500

Beam:

(217.02, 223.05) -> (217.02, 223.03)

Distance:

200.0 -> 199.76

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.46 6.68 2.46
Low resolution limit 66.06 66.08 2.5
Completeness 97.4 92.8 96.0
Multiplicity 3.4 3.4 3.3
I/sigma 11.9 23.2 3.9
Rmerge 0.083 0.041 0.406
CC half 0.959 0.988 0.03
Anomalous completeness 88.0 89.1 83.2
Anomalous multiplicity 1.9 1.9 1.9
Cell 37.257 83.888 107.166 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.