X-Ray Diffraction data from S. cerevisiae Csm1-Dse3 complex, source of 6DEI structure

Data DOI: 10.15785/SBGRID/585 | ID: 585

6DEI Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Corbett Laboratory, University of California, San Diego

Release Date: 25 Sep 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/585

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/585 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/585 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/585 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/585 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 585 ; shasum -c files.sha'

Storage requirements: 5.3G

Biological Sample:

S. cerevisiae Csm1-Dse3 complex

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

SSRL Beamline 9-2

Data Creation Date:

19 Feb 2017

Related Datasets:

None


Cite this Dataset

Singh, N; Corbett, KD. 2018. "X-Ray Diffraction data for: S. cerevisiae Csm1-Dse3 complex. PDB Code 6DEI", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/585.

Download Citation

Dataset Description

Single-wavelength dataset for S. cerevisiae Csm1-Dse3 complex

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin D CorbettDepositorUC San Diego
Namit SinghData CollectorUC San Diego
Kevin CorbettPIUniversity of California, San Diego

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.99833

Sweep:

SWEEP1

Files:

/programs/datagrid/585/c_mG2_6_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 212.03)

Distance:

300.0 -> 300.05

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.77 4.8 1.77
Low resolution limit 51.25 51.27 1.8
Completeness 99.3 99.7 99.1
Multiplicity 5.8 5.5 5.8
I/sigma 8.2 21.7 1.5
Rmerge 0.148 0.044 1.101
CC half 0.995 0.998 0.467
Anomalous completeness 97.4 99.0 97.9
Anomalous multiplicity 3.1 3.1 3.1
Cell 41.485 51.249 118.036 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.99833

Sweep:

SWEEP1

Files:

/programs/datagrid/585/c_mG2_6_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.91)

Distance:

300.0 -> 299.7

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.73 4.69 1.73
Low resolution limit 31.18 31.18 1.76
Completeness 99.7 100.0 99.2
Multiplicity 6.5 5.9 6.7
I/sigma 9.4 27.9 1.2
Rmerge 0.123 0.043 1.543
CC half 0.998 0.998 0.541
Anomalous completeness 98.6 98.6 98.6
Anomalous multiplicity 3.5 3.5 3.5
Cell 41.46 51.24 117.87 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.99833

Sweep:

SWEEP1

Files:

/programs/datagrid/585/c_mG2_6_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.9)

Distance:

300.0 -> 299.62

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.73 4.69 1.73
Low resolution limit 41.46 41.47 1.76
Completeness 99.7 100.0 99.2
Multiplicity 6.5 5.9 6.7
I/sigma 9.4 27.8 1.2
Rmerge 0.123 0.043 1.538
CC half 0.998 0.998 0.497
Anomalous completeness 98.6 98.6 98.5
Anomalous multiplicity 3.5 3.5 3.5
Cell 41.46 51.24 117.87 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.99833

Sweep:

SWEEP1

Files:

/programs/datagrid/585/c_mG2_6_#####.cbf

Images:

1 - 900

Beam:

(217.32, 211.82) -> (217.32, 211.9)

Distance:

300.0 -> 299.74

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 1.69 4.58 1.69
Low resolution limit 41.48 41.49 1.72
Completeness 99.7 100.0 97.1
Multiplicity 6.3 6.0 6.5
I/sigma 7.4 19.5 1.5
Rmerge 0.132 0.047 0.786
CC half 0.997 0.998 0.434
Anomalous completeness 98.7 99.5 96.9
Anomalous multiplicity 3.4 3.4 3.4
Cell 41.48 51.271 117.935 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.