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X-Ray Diffraction data from p190RhoGAP-A N-GTPase domain, source of 6D4G structure

Data DOI: 10.15785/SBGRID/575 | ID: 575

Publication DOI: 10.1016/j.str.2018.07.015

6D4G Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: Aug. 31, 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/575

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/575 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/575 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/575 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/575 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 575 ; shasum -c files.sha'

Storage requirements: 49G

Biological Sample:

p190RhoGAP-A N-GTPase domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS NE-CAT-E

Data Creation Date:

March 11, 2017

Related Datasets:

None


Cite this Dataset

Stiegler, AL; Boggon, TJ. 2018. "X-Ray Diffraction data for: p190RhoGAP-A N-GTPase domain. PDB Code 6D4G", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/575.

Download Citation

Dataset Description

8 sweeps

Project Members

Name Additional Roles Affiliation While Working on the Project
Amy L StieglerData CollectorYale University School of Medicine
Titus J BoggonDepositor, PIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP8

Files:

/programs/datagrid/575/TJB13P13_8_1_######.cbf

Images:

360 - 719

Beam:

(163.62, 154.83) -> (163.62, 154.79)

Distance:

300.0 -> 295.68

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.87 7.77 2.87
Low resolution limit 41.37 41.37 2.92
Completeness 99.9 100.0 100.0
Multiplicity 28.5 46.5 6.9
I/sigma 17.6 62.2 0.7
Rmerge 0.129 0.08 1.916
CC half 0.999 0.999 0.346
Anomalous completeness 99.7 100.0 100.0
Anomalous multiplicity 15.6 15.6 15.6
Cell 43.77 69.45 154.5 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP8

Files:

/programs/datagrid/575/TJB13P13_8_1_######.cbf

Images:

360 - 719

Beam:

(163.62, 154.83) -> (163.62, 154.8)

Distance:

300.0 -> 299.14

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.68 7.27 2.68
Low resolution limit 63.34 63.36 2.73
Completeness 99.9 100.0 99.7
Multiplicity 24.8 46.4 7.0
I/sigma 14.9 57.1 0.8
Rmerge 0.127 0.081 1.858
CC half 0.999 0.999 0.273
Anomalous completeness 99.7 100.0 99.7
Anomalous multiplicity 13.5 13.5 13.5
Cell 43.77 69.45 154.5 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP8

Files:

/programs/datagrid/575/TJB13P13_8_1_######.cbf

Images:

360 - 719

Beam:

(163.62, 154.83) -> (163.62, 154.8)

Distance:

300.0 -> 297.01

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.6 7.05 2.6
Low resolution limit 69.19 69.21 2.64
Completeness 99.8 100.0 98.5
Multiplicity 23.9 48.6 7.0
I/sigma 11.9 40.7 0.9
Rmerge 0.137 0.087 1.433
CC half 0.999 0.998 0.525
Anomalous completeness 99.7 99.6 98.4
Anomalous multiplicity 13.0 13.0 13.0
Cell 43.657 69.189 153.906 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.