X-Ray Diffraction data from p190RhoGAP-A N-GTPase domain, source of 6D4G structure

Data DOI: 10.15785/SBGRID/575 | ID: 575

Publication DOI: 10.1016/j.str.2018.07.015

6D4G Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Boggon Laboratory, Yale University School of Medicine

Release Date: 31 Aug 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/575

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/575 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/575 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/575 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/575 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 575 ; shasum -c files.sha'

Storage requirements: 49G

Biological Sample:

p190RhoGAP-A N-GTPase domain

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

APS NE-CAT-E

Data Creation Date:

11 Mar 2017

Related Datasets:

None


Cite this Dataset

Stiegler, AL; Boggon, TJ. 2018. "X-Ray Diffraction data for: p190RhoGAP-A N-GTPase domain. PDB Code 6D4G", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/575.

Download Citation

Dataset Description

8 sweeps

Project Members

Name Additional Roles Affiliation While Working on the Project
Amy L StieglerData CollectorYale University School of Medicine
Titus J BoggonDepositor, PIYale University School of Medicine

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

Version:

version unreported

Reprocessing failed.

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP8

Files:

/programs/datagrid/575/TJB13P13_8_1_######.cbf

Images:

360 - 719

Beam:

(163.62, 154.83) -> (163.62, 154.79)

Distance:

300.0 -> 295.62

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.76 7.48 2.76
Low resolution limit 41.37 41.37 2.81
Completeness 100.0 100.0 100.0
Multiplicity 38.5 46.8 7.0
I/sigma 16.9 52.4 1.1
Rmerge 0.155 0.085 1.319
CC half 0.999 0.999 0.471
Anomalous completeness 99.8 100.0 100.0
Anomalous multiplicity 21.0 21.0 21.0
Cell 43.77 69.45 154.5 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP8

Files:

/programs/datagrid/575/TJB13P13_8_1_######.cbf

Images:

360 - 719

Beam:

(163.62, 154.83) -> (163.62, 154.8)

Distance:

300.0 -> 299.13

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.75 7.46 2.75
Low resolution limit 63.34 63.36 2.8
Completeness 100.0 100.0 100.0
Multiplicity 38.0 46.5 7.1
I/sigma 16.7 52.1 1.1
Rmerge 0.154 0.085 1.362
CC half 0.999 0.999 0.491
Anomalous completeness 99.8 100.0 100.0
Anomalous multiplicity 20.7 20.7 20.7
Cell 43.77 69.45 154.5 90.0 90.0 90.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97918

Sweep:

SWEEP8

Files:

/programs/datagrid/575/TJB13P13_8_1_######.cbf

Images:

360 - 719

Beam:

(163.62, 154.83) -> (163.62, 154.8)

Distance:

300.0 -> 297.01

Spacegroup:

P 21 21 21

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.65 7.19 2.65
Low resolution limit 76.95 76.99 2.69
Completeness 99.9 100.0 96.8
Multiplicity 38.3 48.6 6.9
I/sigma 14.2 40.6 1.6
Rmerge 0.173 0.09 0.749
CC half 0.999 0.999 0.436
Anomalous completeness 99.6 99.8 96.5
Anomalous multiplicity 20.8 20.8 20.8
Cell 43.657 69.191 153.908 90.0 90.0 90.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.